From mboxrd@z Thu Jan 1 00:00:00 1970 Received: from eggs.gnu.org ([2001:470:142:3::10]:36817) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1itcoF-0001QK-MQ for guix-patches@gnu.org; Mon, 20 Jan 2020 14:34:04 -0500 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1itcoE-0002od-FK for guix-patches@gnu.org; Mon, 20 Jan 2020 14:34:03 -0500 Received: from debbugs.gnu.org ([209.51.188.43]:40106) by eggs.gnu.org with esmtps (TLS1.0:RSA_AES_128_CBC_SHA1:16) (Exim 4.71) (envelope-from ) id 1itcoE-0002oV-Cg for guix-patches@gnu.org; Mon, 20 Jan 2020 14:34:02 -0500 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1itcoE-0007d5-Ak for guix-patches@gnu.org; Mon, 20 Jan 2020 14:34:02 -0500 Subject: [bug#39201] [PATCH] gnu: Add r-deconstructsigs. Resent-Message-ID: Message-ID: From: Roel Janssen Date: Mon, 20 Jan 2020 20:32:56 +0100 In-Reply-To: <87h80qw9ml.fsf@elephly.net> References: <5d8aa06a6dd9845acfab5685b4106e7c382a7887.camel@gnu.org> <87h80qw9ml.fsf@elephly.net> Content-Type: multipart/mixed; boundary="=-OOrcuXoi28oR/O3ZbpkM" MIME-Version: 1.0 List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+kyle=kyleam.com@gnu.org Sender: "Guix-patches" To: Ricardo Wurmus Cc: 39201@debbugs.gnu.org --=-OOrcuXoi28oR/O3ZbpkM Content-Type: text/plain; charset="UTF-8" Content-Transfer-Encoding: 8bit Hi Ricardo! On Mon, 2020-01-20 at 14:16 +0100, Ricardo Wurmus wrote: > Hi Roel, > > > Here's a patch to add r-deconstructsigs. I added it to the cran module > > because that's where it originates from, but it takes a reference > > genome from bioconductor. So I had to use the bioconductor module. Is > > that OK? > > Please add the package to the bioconductor module instead and add a > comment above to explain why. (That’s what we’ve done for other > packages like this.) So I did. Thanks for pointing this out. I attached the new patch. Thanks Ricardo! Kind regards, Roel Janssen --=-OOrcuXoi28oR/O3ZbpkM Content-Disposition: attachment; filename="0001-gnu-Add-r-deconstructsigs.patch" Content-Type: text/x-patch; name="0001-gnu-Add-r-deconstructsigs.patch"; charset="UTF-8" Content-Transfer-Encoding: base64 RnJvbSA0MDNhODA3NTRjM2Y1M2MyOWM0NDMwY2M1YTUzN2VlNzgxY2M5YjFlIE1vbiBTZXAgMTcg MDA6MDA6MDAgMjAwMQpGcm9tOiBSb2VsIEphbnNzZW4gPHJvZWxAZ251Lm9yZz4KRGF0ZTogTW9u LCAyMCBKYW4gMjAyMCAyMDoyMTowOSArMDEwMApTdWJqZWN0OiBbUEFUQ0hdIGdudTogQWRkIHIt ZGVjb25zdHJ1Y3RzaWdzLgoKKiBnbnUvcGFja2FnZXMvYmlvY29uZHVjdG9yLnNjbSAoci1kZWNv bnN0cnVjdHNpZ3MpOiBOZXcgdmFyaWFibGUuCi0tLQogZ251L3BhY2thZ2VzL2Jpb2NvbmR1Y3Rv ci5zY20gfCAyOCArKysrKysrKysrKysrKysrKysrKysrKysrKysrCiAxIGZpbGUgY2hhbmdlZCwg MjggaW5zZXJ0aW9ucygrKQoKZGlmZiAtLWdpdCBhL2dudS9wYWNrYWdlcy9iaW9jb25kdWN0b3Iu c2NtIGIvZ251L3BhY2thZ2VzL2Jpb2NvbmR1Y3Rvci5zY20KaW5kZXggZWYzNGI5OTY0OS4uZDQx OTRlOGVjMiAxMDA2NDQKLS0tIGEvZ251L3BhY2thZ2VzL2Jpb2NvbmR1Y3Rvci5zY20KKysrIGIv Z251L3BhY2thZ2VzL2Jpb2NvbmR1Y3Rvci5zY20KQEAgLTY5NCw2ICs2OTQsMzQgQEAgYW5ub3Rh dGlvbnMuIikKICAgICAgIlRoaXMgaXMgYSBtYW5pZmVzdCBwYWNrYWdlIGZvciBJbGx1bWluYSdz IEVQSUMgbWV0aHlsYXRpb24gYXJyYXlzLiIpCiAgICAgKGxpY2Vuc2UgbGljZW5zZTphcnRpc3Rp YzIuMCkpKQogCis7OyBUaGlzIGlzIGEgQ1JBTiBwYWNrYWdlLCBidXQgaXQgZGVwZW5kcyBvbiBy LWJzZ2Vub21lLWhzYXBpZW5zLXVjc2MtaGcxOQorOzsgZnJvbSBCaW9jb25kdWN0b3IuCisoZGVm aW5lLXB1YmxpYyByLWRlY29uc3RydWN0c2lncworICAocGFja2FnZQorICAgIChuYW1lICJyLWRl Y29uc3RydWN0c2lncyIpCisgICAgKHZlcnNpb24gIjEuOC4wIikKKyAgICAoc291cmNlIChvcmln aW4KKyAgICAgICAgICAgICAgKG1ldGhvZCB1cmwtZmV0Y2gpCisgICAgICAgICAgICAgICh1cmkg KGNyYW4tdXJpICJkZWNvbnN0cnVjdFNpZ3MiIHZlcnNpb24pKQorICAgICAgICAgICAgICAoc2hh MjU2CisgICAgICAgICAgICAgICAoYmFzZTMyCisgICAgICAgICAgICAgICAgIjAxNHgwbmIyM2pi OTg2NjZrYWF2MnBoa3Zta3IzOHBpMzhqdjBkcWQ0anY3enAwZ2RmMWEiKSkpKQorICAgIChwcm9w ZXJ0aWVzCisgICAgIGAoKHVwc3RyZWFtLW5hbWUgLiAiZGVjb25zdHJ1Y3RTaWdzIikpKQorICAg IChidWlsZC1zeXN0ZW0gci1idWlsZC1zeXN0ZW0pCisgICAgKHByb3BhZ2F0ZWQtaW5wdXRzCisg ICAgIGAoKCJyLWJzZ2Vub21lIiAsci1ic2dlbm9tZSkKKyAgICAgICAoInItYnNnZW5vbWUtaHNh cGllbnMtdWNzYy1oZzE5IiAsci1ic2dlbm9tZS1oc2FwaWVucy11Y3NjLWhnMTkpCisgICAgICAg KCJyLWdlbm9tZWluZm9kYiIgLHItZ2Vub21laW5mb2RiKQorICAgICAgICgici1yZXNoYXBlMiIg LHItcmVzaGFwZTIpKSkKKyAgICAoaG9tZS1wYWdlICJodHRwczovL2dpdGh1Yi5jb20vcmFlcm9z ZTAxL2RlY29uc3RydWN0U2lncyIpCisgICAgKHN5bm9wc2lzICJJZGVudGlmaWVzIHNpZ25hdHVy ZXMgcHJlc2VudCBpbiBhIHR1bW9yIHNhbXBsZSIpCisgICAgKGRlc2NyaXB0aW9uICJUaGlzIHBh Y2thZ2UgdGFrZXMgc2FtcGxlIGluZm9ybWF0aW9uIGluIHRoZSBmb3JtIG9mIHRoZQorZnJhY3Rp b24gb2YgbXV0YXRpb25zIGluIGVhY2ggb2YgOTYgdHJpbnVjbGVvdGlkZSBjb250ZXh0cyBhbmQg aWRlbnRpZmllcwordGhlIHdlaWdodGVkIGNvbWJpbmF0aW9uIG9mIHB1Ymxpc2hlZCBzaWduYXR1 cmVzIHRoYXQsIHdoZW4gc3VtbWVkLCBtb3N0CitjbG9zZWx5IHJlY29uc3RydWN0cyB0aGUgbXV0 YXRpb25hbCBwcm9maWxlLiIpCisgICAgKGxpY2Vuc2UgbGljZW5zZTpncGwyKykpKQorCiAoZGVm aW5lLXB1YmxpYyByLWRvLWRiCiAgIChwYWNrYWdlCiAgICAgKG5hbWUgInItZG8tZGIiKQotLSAK Mi4yNS4wCgo= --=-OOrcuXoi28oR/O3ZbpkM--