From: Sharlatan Hellseher <sharlatanus@gmail.com>
To: 71702@debbugs.gnu.org
Cc: Sharlatan Hellseher <sharlatanus@gmail.com>,
Lars-Dominik Braun <lars@6xq.net>, Marius Bakke <marius@gnu.org>,
Munyoki Kilyungi <me@bonfacemunyoki.com>,
Sharlatan Hellseher <sharlatanus@gmail.com>,
Tanguy Le Carrour <tanguy@bioneland.org>,
jgart <jgart@dismail.de>
Subject: [bug#71702] [PATCH 22/30] gnu: Add python-corner.
Date: Fri, 21 Jun 2024 19:38:44 +0100 [thread overview]
Message-ID: <a74a3782fa276285a1fcadb07e3c5338086fb5c8.1718966788.git.sharlatanus@gmail.com> (raw)
In-Reply-To: <cover.1718966788.git.sharlatanus@gmail.com>
* gnu/packages/python-science.scm (python-corner): New variable.
Change-Id: I75c3a88ba4b729fb7c9a50dd85a00b22cdcaa828
---
gnu/packages/python-science.scm | 57 +++++++++++++++++++++++++++++++++
1 file changed, 57 insertions(+)
diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm
index 58b7f3b3ee..401beecbcd 100644
--- a/gnu/packages/python-science.scm
+++ b/gnu/packages/python-science.scm
@@ -2872,6 +2872,63 @@ (define-public python-climin
@command{numpy} and (partially) @command{gnumpy}.")
(license license:bsd-3)))
+(define-public python-corner
+ (package
+ (name "python-corner")
+ (version "2.2.2")
+ (source
+ (origin
+ (method git-fetch) ;no tests in PyPi archive
+ (uri (git-reference
+ (url "https://github.com/dfm/corner.py")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "1i4dk4jxh0saysya2cnsfwlxwpldbdl174i9pwi4qj82av9jr2ii"))))
+ (build-system pyproject-build-system)
+ (arguments
+ (list
+ #:test-flags
+ #~(list
+ ;; XXX: Disable tests which failed with mismatched images, check why.
+ "-k" (string-append "not test_labels[png]"
+ " and not test_title_quantiles[png]"
+ " and not test_title_quantiles_default[png]"
+ " and not test_title_quantiles_raises[png]"
+ " and not test_bins[png]"
+ " and not test_bins_log[png]"
+ " and not test_titles1[png]"
+ " and not test_titles2[png]"
+ " and not test_pandas[png]"
+ " and not test_tight[png]"
+ " and not test_extended_overplotting[png]"
+ " and not test_reverse_overplotting[png]"
+ " and not test_arviz[png]"
+ " and not test_range_fig_arg[png]"))
+ #:phases
+ #~(modify-phases %standard-phases
+ (add-before 'build 'pretend-version
+ ;; XXX: Make sure you're either building from a fully intact git
+ ;; repository or PyPI tarballs. Most other sources (such as GitHub's
+ ;; tarballs, a git checkout without the .git folder) don't contain
+ ;; the necessary metadata and will not work.
+ (lambda _
+ (setenv "SETUPTOOLS_SCM_PRETEND_VERSION" #$version))))))
+ (propagated-inputs
+ (list python-matplotlib))
+ (native-inputs
+ (list python-arviz python-pytest python-scipy python-setuptools-scm))
+ (home-page "http://corner.readthedocs.io/")
+ (synopsis "Make some beautiful corner plots")
+ (description
+ "This Python module uses @code{matplotlib} to visualize multidimensional
+samples using a scatterplot matrix. In these visualizations, each one- and
+two-dimensional projection of the sample is plotted to reveal covariances.
+corner was originally conceived to display the results of Markov Chain Monte
+Carlo simulations and the defaults are chosen with this application in mind but
+it can be used for displaying many qualitatively different samples.")
+ (license license:bsd-2)))
+
(define-public python-paramz
(package
(name "python-paramz")
--
2.41.0
next prev parent reply other threads:[~2024-06-21 18:42 UTC|newest]
Thread overview: 32+ messages / expand[flat|nested] mbox.gz Atom feed top
2024-06-21 10:55 [bug#71702] [PATCH 00/30] Astronomy update 2024/06 Sharlatan Hellseher
2024-06-21 18:38 ` [bug#71702] [PATCH 01/30] gnu: indi-2.0: Update to 2.0.8 Sharlatan Hellseher
2024-06-21 18:38 ` [bug#71702] [PATCH 02/30] gnu: siril: Update to 1.2.3 Sharlatan Hellseher
2024-06-21 18:38 ` [bug#71702] [PATCH 03/30] gnu: python-astropy: Update to 6.1.1 Sharlatan Hellseher
2024-06-21 18:38 ` [bug#71702] [PATCH 04/30] gnu: python-astropy-iers-data: Update to 0.2024.6.17.0.31.35 Sharlatan Hellseher
2024-06-21 18:38 ` [bug#71702] [PATCH 05/30] gnu: python-crds: Update to 11.17.25 Sharlatan Hellseher
2024-06-21 18:38 ` [bug#71702] [PATCH 06/30] gnu: python-drizzle: Update to 1.15.2 Sharlatan Hellseher
2024-06-21 18:38 ` [bug#71702] [PATCH 07/30] gnu: python-dust-extinction: Update to 1.4.1 Sharlatan Hellseher
2024-06-21 18:38 ` [bug#71702] [PATCH 08/30] gnu: python-fitsio: Update to 1.2.4 Sharlatan Hellseher
2024-06-21 18:38 ` [bug#71702] [PATCH 09/30] gnu: python-ginga: Update to 5.1.0 Sharlatan Hellseher
2024-06-21 18:38 ` [bug#71702] [PATCH 10/30] gnu: python-ndcube: Update to 2.2.2 Sharlatan Hellseher
2024-06-21 18:38 ` [bug#71702] [PATCH 11/30] gnu: python-pyerfa: Update to 2.0.1.4 Sharlatan Hellseher
2024-06-21 18:38 ` [bug#71702] [PATCH 12/30] gnu: python-pyvo: Update to 1.5.2 Sharlatan Hellseher
2024-06-21 18:38 ` [bug#71702] [PATCH 13/30] gnu: python-skyfield: Update to 1.49 Sharlatan Hellseher
2024-06-21 18:38 ` [bug#71702] [PATCH 14/30] gnu: python-spherical-geometry: Update to 1.3.2 Sharlatan Hellseher
2024-06-21 18:38 ` [bug#71702] [PATCH 15/30] gnu: python-stcal: Update to 1.7.1 Sharlatan Hellseher
2024-06-21 18:38 ` [bug#71702] [PATCH 16/30] gnu: python-stpipe: Update to 0.5.2 Sharlatan Hellseher
2024-06-21 18:38 ` [bug#71702] [PATCH 17/30] gnu: python-stsci-image: Update to 2.3.9 Sharlatan Hellseher
2024-06-21 18:38 ` [bug#71702] [PATCH 18/30] gnu: python-stsci-imagestats: Update to 1.8.3 Sharlatan Hellseher
2024-06-21 18:38 ` [bug#71702] [PATCH 19/30] gnu: python-stsci-stimage: Update to 0.2.9 Sharlatan Hellseher
2024-06-21 18:38 ` [bug#71702] [PATCH 20/30] gnu: python-sunpy: Update to 5.1.4 Sharlatan Hellseher
2024-06-21 18:38 ` [bug#71702] [PATCH 21/30] gnu: python-jwst: Replace reference to external configobj Sharlatan Hellseher
2024-06-21 18:38 ` Sharlatan Hellseher [this message]
2024-06-21 18:38 ` [bug#71702] [PATCH 23/30] gnu: Add python-fast-histogram Sharlatan Hellseher
2024-06-21 18:38 ` [bug#71702] [PATCH 24/30] gnu: Add python-naima Sharlatan Hellseher
2024-06-21 18:38 ` [bug#71702] [PATCH 25/30] gnu: Add python-regularizepsf Sharlatan Hellseher
2024-06-21 18:38 ` [bug#71702] [PATCH 26/30] gnu: Add python-schwimmbad Sharlatan Hellseher
2024-06-21 18:38 ` [bug#71702] [PATCH 27/30] gnu: Add python-statmorph Sharlatan Hellseher
2024-06-21 18:38 ` [bug#71702] [PATCH 28/30] gnu: Add python-yt-astro-analysis Sharlatan Hellseher
2024-06-21 18:38 ` [bug#71702] [PATCH 29/30] gnu: Add specification-specreduce-data Sharlatan Hellseher
2024-06-21 18:38 ` [bug#71702] [PATCH 30/30] gnu: Add python-jwst-reffiles Sharlatan Hellseher
2024-06-30 9:22 ` bug#71702: [PATCH 00/30] Astronomy update 2024/06 Sharlatan Hellseher
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