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Resent-From: =?UTF-8?Q?M=C4=83d=C4=83lin?= Ionel =?UTF-8?Q?Patra=C8=99cu?= Original-Sender: "Debbugs-submit" Resent-CC: rekado@elephly.net, guix-patches@gnu.org Resent-Date: Mon, 06 Nov 2023 11:10:03 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 66966 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: <66966@debbugs.gnu.org> Cc: Ricardo Wurmus X-Debbugs-Original-Xcc: Ricardo Wurmus Received: via spool by 66966-submit@debbugs.gnu.org id=B66966.169926895816555 (code B ref 66966); Mon, 06 Nov 2023 11:10:03 +0000 Received: (at 66966) by debbugs.gnu.org; 6 Nov 2023 11:09:18 +0000 Received: from localhost ([127.0.0.1]:38744 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1qzxTp-0004Ir-H1 for submit@debbugs.gnu.org; Mon, 06 Nov 2023 06:09:17 -0500 Received: from c2062.mx.srv.dfn.de ([194.95.238.172]:51529) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1qzxTZ-0004GU-JW for 66966@debbugs.gnu.org; Mon, 06 Nov 2023 06:09:10 -0500 DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=mdc-berlin.de; h= content-type:content-type:content-transfer-encoding:mime-version :references:in-reply-to:x-mailer:message-id:date:date:subject :subject:from:from:received; s=mdc; t=1699268897; x=1701083298; bh=H3fUpJOTWmZQ1wTwHzIiHkPWPOmS1UK3En9BuWuWRUM=; b=nuGKnBU81CwS CCQhGUWkOW/5HcUJoK7FHIpnZFUUzfv9Rui2mcYRz1+hElaafrvr16FUNKLuA5AA fnxVYzx4Xp2AbDomLMPuocCT3K0IbboywsVzLk5f5jw6LJf8zwzGpl/RrMe6TZ0B Kwt2cThveVg+EGiqNmPQIqiCTiPyg0Q= Received: from SW-IT-P-EX2.mdc-berlin.net (mgw2.mdc-berlin.de [141.80.113.60]) by c2062.mx.srv.dfn.de (Postfix) with ESMTPS id 7783130013D for <66966@debbugs.gnu.org>; Mon, 6 Nov 2023 12:08:17 +0100 (CET) Received: from Guix-Ubuntu18.04 (141.80.113.106) by SW-IT-P-EX2.mdc-berlin.net (141.80.113.60) with Microsoft SMTP Server (version=TLS1_2, cipher=TLS_ECDHE_RSA_WITH_AES_256_GCM_SHA384) id 15.1.2507.34; Mon, 6 Nov 2023 12:08:16 +0100 From: =?UTF-8?Q?M=C4=83d=C4=83lin?= Ionel =?UTF-8?Q?Patra=C8=99cu?= Date: Mon, 6 Nov 2023 12:06:38 +0100 Message-ID: X-Mailer: git-send-email 2.41.0 In-Reply-To: <302230715db60dbcab23676e1c67c53a567884e2.1699268809.git.madalinionel.patrascu@mdc-berlin.de> References: <302230715db60dbcab23676e1c67c53a567884e2.1699268809.git.madalinionel.patrascu@mdc-berlin.de> MIME-Version: 1.0 Content-Transfer-Encoding: 8bit Content-Type: text/plain X-Originating-IP: [141.80.113.106] X-ClientProxiedBy: SW-IT-P-EX3.mdc-berlin.net (141.80.113.61) To SW-IT-P-EX2.mdc-berlin.net (141.80.113.60) X-TM-AS-Product-Ver: SMEX-14.0.0.3092-9.0.1002-27980.005 X-TM-AS-Result: No-10--1.616600-5.000000 X-TMASE-MatchedRID: /+von0vPuFFRLIODtwQzSQrcxrzwsv5ucV3n4J/0zUPAuQ0xDMaXkH4q tYI9sRE/KqrQ7lLcMnwarNv4Gp08Kiq+GZ9ZHxIhuW77/y896siFzNNPDc6umEyMkq5fGHu2b0G qwJsp9xGLUu/J42Z1x0RANK+qXqVK0N7DjAdxZNTi8zVgXoAltuJ5hXsnxp7jC24oEZ6SpSk6XE E7Yhw4FhPUbt73N46efBaHDy587UgKK8fETp49OyUwbC/lx7naG4HEWoNpNohO4nxMC94oh96WU 23xCL5M74cTiJuk7Uql27A48IN9Wt8iatREjfpDE8nb9DwdQ4C2jbSab1pg0UjxFpwn53SOfhj5 CZkmSyI= X-TM-AS-User-Approved-Sender: Yes X-TM-AS-User-Blocked-Sender: No X-TMASE-Result: 10--1.616600-5.000000 X-TMASE-Version: SMEX-14.0.0.3092-9.0.1002-27980.005 X-TM-SNTS-SMTP: 4ACE8C9C12F06A5D4DDBB99271F73B89B05168D82C55D3540568D8CA54DD47322000:F X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+larch=yhetil.org@gnu.org Sender: guix-patches-bounces+larch=yhetil.org@gnu.org X-Migadu-Flow: FLOW_IN X-Migadu-Country: US X-Migadu-Queue-Id: E98235C24D X-Migadu-Scanner: mx12.migadu.com X-Migadu-Spam-Score: -3.91 X-Spam-Score: -3.91 X-TUID: 3wYTTp1iyFTF * gnu/packages/bioconductor.scm (r-bags): New variable. Change-Id: If0c533898a5e05809f23e7e8b52fc3d5fbffc8fb --- gnu/packages/bioconductor.scm | 21 +++++++++++++++++++++ 1 file changed, 21 insertions(+) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 04a1f2a710..47931061af 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -4036,6 +4036,27 @@ (define-public r-baalchip alleles, a known phenotypical feature of cancer samples.") (license license:artistic2.0))) +(define-public r-bags + (package + (name "r-bags") + (version "2.42.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "BAGS" version)) + (sha256 + (base32 "0356ragpcldr48yycqj91sn3bcqvvfp5spv2z02r8g6hs0dndwdh")))) + (properties `((upstream-name . "BAGS"))) + (build-system r-build-system) + (propagated-inputs (list r-biobase r-breastcancervdx)) + (home-page "https://bioconductor.org/packages/BAGS") + (synopsis "Bayesian approach for geneset selection") + (description + "This R package is providing functions to perform geneset significance +analysis over simple cross-sectional data between 2 and 5 phenotypes of +interest.") + (license license:artistic2.0))) + (define-public r-basespacer (package (name "r-basespacer") -- 2.41.0