From: "Mădălin Ionel Patrașcu" <madalinionel.patrascu@mdc-berlin.de>
To: <66921@debbugs.gnu.org>
Cc: Ricardo Wurmus <rekado@elephly.net>
Subject: [bug#66921] [PATCH 4/5] gnu: Add r-powertcr.
Date: Fri, 3 Nov 2023 17:30:03 +0100 [thread overview]
Message-ID: <a0a6740a9dd6042f0184388005eebd85b7e40172.1699029004.git.madalinionel.patrascu@mdc-berlin.de> (raw)
In-Reply-To: <295ae4566681826b406dea240db641124f1d60a0.1699029004.git.madalinionel.patrascu@mdc-berlin.de>
* gnu/packages/bioconductor.scm (r-powertcr): New variable.
Change-Id: I75fc30a7021d6199b768318da3afcfeaaafcf027
---
gnu/packages/bioconductor.scm | 31 +++++++++++++++++++++++++++++++
1 file changed, 31 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index d79236ea26..b683868df5 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -9236,6 +9236,37 @@ (define-public r-piano
set analyses.")
(license license:gpl2+)))
+(define-public r-powertcr
+ (package
+ (name "r-powertcr")
+ (version "1.22.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "powerTCR" version))
+ (sha256
+ (base32 "06fmphdq95pjbbvm8m8h1wajbp3vhl0zj7ddbzks9fy7ankp1n3i"))))
+ (properties `((upstream-name . "powerTCR")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-cubature
+ r-doparallel
+ r-evmix
+ r-foreach
+ r-magrittr
+ r-purrr
+ r-truncdist
+ r-vegan
+ r-vgam))
+ (native-inputs (list r-knitr))
+ (home-page "https://bioconductor.org/packages/powerTCR")
+ (synopsis "Model-based comparative analysis of the TCR repertoire")
+ (description
+ "This package provides a model for the clone size distribution of the
+@acronym{TCR, T-cell receptor} repertoire. Further, it permits comparative
+analysis of TCR repertoire libraries based on theoretical model fits.")
+ (license license:artistic2.0)))
+
;; This is a CRAN package, but it depends on a Bioconductor package:
;; r-aroma-light, r-dnacopy..
(define-public r-pscbs
--
2.41.0
next prev parent reply other threads:[~2023-11-03 16:33 UTC|newest]
Thread overview: 7+ messages / expand[flat|nested] mbox.gz Atom feed top
2023-11-03 16:27 [bug#66921] [patch] Add r-screpertoire, r-powertcr, r-evmix, r-truncdist and r-evd Mădălin Ionel Patrașcu
2023-11-03 16:30 ` [bug#66921] [PATCH 1/5] gnu: Add r-evd Mădălin Ionel Patrașcu
2023-11-03 16:30 ` [bug#66921] [PATCH 2/5] gnu: Add r-truncdist Mădălin Ionel Patrașcu
2023-11-03 16:30 ` [bug#66921] [PATCH 3/5] gnu: Add r-evmix Mădălin Ionel Patrașcu
2023-11-03 16:30 ` Mădălin Ionel Patrașcu [this message]
2023-11-03 16:30 ` [bug#66921] [PATCH 5/5] gnu: Add r-screpertoire Mădălin Ionel Patrașcu
2023-11-04 22:14 ` bug#66921: [PATCH 1/5] gnu: Add r-evd Ricardo Wurmus
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