[bug#64249] [PATCH v8 13/13] gnu: opam: Update to 2.1.5.

[DABY-SEESARAM Arnaud via Guix-patches via <guix-patches@gnu.org>]

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Hi,

After applying V8 series, I could build
- all packages starting by "coq",
- all packages starting by "ocaml" which do not start by "ocaml4.07".
(I used the guile function `fold-packages` to check this).


Some packages still fail to build.

- At least some ocaml4.07* packages are broken.
  I have not looked at them, as some of them seem to be broken on master 
  as well.

- why3 was broken.
  Upgrading it to 1.6.0 fixes it.

- frama-c was broken.
  This too could be fixed by upgrading frama-c.

  The build process of frama-c has changed between the last packaged 
  version (24.0-Chromium) and the current one (27.1-Cobalt).
  I was able to get frama-c 27.1 to build by switching from 
  ocaml-build-system to dune-build-system and adding a few new 
  dependencies. Although it is not very satisfying yet, as I had to 
  disable tests for some of these dependencies.

I can send you my additional patches to complete the V8 series if you 
wish.

Best,

-- 
ds-ac

Le Fri, Nov 03, 2023 at 11:50:21AM +0000, pukkamustard a écrit
> * gnu/packages/ocaml.scm (opam): Update to 2.1.5.
>   [native-inputs]: Add more test data.
>   [arguments]: Disable failing test.
>   (ocaml-graph): Update to 2.0.0.
>   (ocaml-dose3): Update to 7.0.0.
> * gnu/packages/patches/ocaml-dose3-Fix-for-ocaml-4.06.patch: Remove.
> * gnu/packages/patches/ocaml-dose3-Install-mli-cmx-etc.patch: Remove.
> * gnu/packages/patches/ocaml-dose3-add-unix-dependency.patch: Remove.
> * gnu/packages/patches/ocaml-dose3-dont-make-printconf.patch: Remove.
> * gnu/local.mk (dist_path_DATA): Unregister removed patches.
> ---
>  gnu/local.mk                                  |   4 -
>  gnu/packages/ocaml.scm                        | 132 +++++++++--------
>  .../ocaml-dose3-Fix-for-ocaml-4.06.patch      |  52 -------
>  .../ocaml-dose3-Install-mli-cmx-etc.patch     | 133 ------------------
>  .../ocaml-dose3-add-unix-dependency.patch     |  25 ----
>  .../ocaml-dose3-dont-make-printconf.patch     |   9 --
>  6 files changed, 74 insertions(+), 281 deletions(-)
>  delete mode 100644 gnu/packages/patches/ocaml-dose3-Fix-for-ocaml-4.06.patch
>  delete mode 100644 gnu/packages/patches/ocaml-dose3-Install-mli-cmx-etc.patch
>  delete mode 100644 gnu/packages/patches/ocaml-dose3-add-unix-dependency.patch
>  delete mode 100644 gnu/packages/patches/ocaml-dose3-dont-make-printconf.patch
> 
> diff --git a/gnu/local.mk b/gnu/local.mk
> index 22aeebc0b6..5e5c948e68 100644
> --- a/gnu/local.mk
> +++ b/gnu/local.mk
> @@ -1691,10 +1691,6 @@ dist_patch_DATA =						\
>    %D%/packages/patches/nvi-db4.patch				\
>    %D%/packages/patches/nyacc-binary-literals.patch		\
>    %D%/packages/patches/obs-modules-location.patch		\
> -  %D%/packages/patches/ocaml-dose3-add-unix-dependency.patch	\
> -  %D%/packages/patches/ocaml-dose3-Fix-for-ocaml-4.06.patch	\
> -  %D%/packages/patches/ocaml-dose3-dont-make-printconf.patch	\
> -  %D%/packages/patches/ocaml-dose3-Install-mli-cmx-etc.patch	\
>    %D%/packages/patches/ocaml-multiple-definitions.patch		\
>    %D%/packages/patches/ocaml-4.07-dynamically-allocate-signal-stack.patch	\
>    %D%/packages/patches/ocaml-4.09-dynamically-allocate-signal-stack.patch	\
> diff --git a/gnu/packages/ocaml.scm b/gnu/packages/ocaml.scm
> index 8fd2f2a3cf..12c8d5c27d 100644
> --- a/gnu/packages/ocaml.scm
> +++ b/gnu/packages/ocaml.scm
> @@ -713,7 +713,7 @@ (define-public ocaml-mccs
>  (define-public ocaml-dose3
>    (package
>      (name "ocaml-dose3")
> -    (version "5.0.1")
> +    (version "7.0.0")
>      (source (origin
>                (method git-fetch)
>                (uri (git-reference
> @@ -722,29 +722,16 @@ (define-public ocaml-dose3
>                (file-name (git-file-name name version))
>                (sha256
>                 (base32
> -                "0dxkw37gj8z45kd0dnrlfgpj8yycq0dphs8kjm9kvq9xc8rikxp3"))
> -              (patches
> -               (search-patches
> -                "ocaml-dose3-add-unix-dependency.patch"
> -                "ocaml-dose3-Fix-for-ocaml-4.06.patch"
> -                "ocaml-dose3-dont-make-printconf.patch"
> -                "ocaml-dose3-Install-mli-cmx-etc.patch"))))
> -    (build-system ocaml-build-system)
> -    (arguments
> -     `(#:tests? #f                      ;the test suite requires python 2
> -       #:configure-flags
> -       ,#~(list (string-append "SHELL="
> -                               #+(file-append (canonical-package bash-minimal)
> -                                              "/bin/sh")))
> -       #:make-flags
> -       ,#~(list (string-append "LIBDIR=" #$output "/lib/ocaml/site-lib"))))
> -    (propagated-inputs
> -     (list ocaml-graph ocaml-cudf ocaml-extlib ocaml-re))
> -    (native-inputs
> -     (list perl
> -           ocaml-extlib
> -           ocamlbuild
> -           ocaml-cppo))
> +                "0hcjh68svicap7j9bghgkp49xa12qhxa1pygmrgc9qwm0m4dhirb"))))
> +    (build-system dune-build-system)
> +    (arguments `(#:package "dose3"))
> +    (propagated-inputs (list ocaml-extlib
> +                             ocaml-base64-boot
> +                             ocaml-cudf
> +                             ocaml-graph
> +                             ocaml-re
> +                             ocaml-stdlib-shims))
> +    (native-inputs (list ocaml-ounit))
>      (home-page "https://www.mancoosi.org/software/")
>      (synopsis "Package distribution management framework")
>      (description "Dose3 is a framework made of several OCaml libraries for
> @@ -849,7 +836,7 @@ (define-public ocaml-opam-file-format
>  (define ocaml-opam-core
>    (package
>      (name "ocaml-opam-core")
> -    (version "2.1.3")
> +    (version "2.1.5")
>      (source (origin
>                (method git-fetch)
>                (uri (git-reference
> @@ -858,7 +845,7 @@ (define ocaml-opam-core
>                (file-name (git-file-name name version))
>                (sha256
>                 (base32
> -                "1mw535zsw7xlvpgwnk1dan76z3f7lh5imlg0s6kdyhfg0iqisjd7"))))
> +                "0ckd87rcmcz11iyhhm5qnmy27jbdffx6n1fr06hvrqqrzi00jljh"))))
>      (build-system dune-build-system)
>      (arguments `(#:package "opam-core"
>                   ;; tests are run with the opam package
> @@ -1037,7 +1024,10 @@ (define-public opam
>                 (("diff opamroot-versions.test opamroot-versions.out") "run true")
>                 ;; Disable a failing test, probably because the repository we
>                 ;; replaced is not as expected
> -               (("diff opamrt-big-upgrade.test opamrt-big-upgrade.out") "run true"))
> +               (("diff opamrt-big-upgrade.test opamrt-big-upgrade.out") "run true")
> +               ;; Disable a failing test because of missing sandboxing
> +               ;; functionality
> +               (("diff init.test init.out") "run true"))
>               (substitute* "tests/reftests/dune"
>                 ;; Because of our changes to the previous file, we cannot check
>                 ;; it can be regenerated
> @@ -1073,18 +1063,42 @@ (define-public opam
>           ("which" ,which)
>  
>           ;; Data for tests
> -         ("opam-repo-009e00fa" ,(opam-repo "009e00fa86300d11c311309a2544e5c6c3eb8de2"
> -                                           "1wwy0rwrsjf4q10j1rh1dazk32fbzhzy6f7zl6qmndidx9b1bq7w"))
> -         ("opam-repo-7090735c" ,(opam-repo "7090735c9d1dd2dc481c4128c5ef4d3667238f15"
> -                                           "1bccsgjhlp64lmvfjfn6viywf3x73ji75myg9ssf1ij1fkmabn0z"))
> -         ("opam-repo-a5d7cdc0" ,(opam-repo "a5d7cdc0c91452b0aef4fa71c331ee5237f6dddd"
> -                                           "0z7kawqisy07088p5xjxwpvmvzlbj1d9cgdipsj90yx7nc5qh369"))
> -         ("opam-repo-ad4dd344" ,(opam-repo "ad4dd344fe5cd1cab49ced49d6758a9844549fb4"
> -                                           "1a1qj47kj8xjdnc4zc50ijrix1kym1n7k20n3viki80a7518baw8"))
> -         ("opam-repo-c1d23f0e" ,(opam-repo "c1d23f0e17ec83a036ebfbad1c78311b898a2ca0"
> -                                           "0j9abisx3ifzm66ci3p45mngmz4f0fx7yd9jjxrz3f8w5jffc9ii"))
> -         ("opam-repo-f372039d" ,(opam-repo "f372039db86a970ef3e662adbfe0d4f5cd980701"
> -                                           "0ld7fcry6ss6fmrpswvr6bikgx299w97h0gwrjjh7kd7rydsjdws")))))
> +         ("opam-repo-0070613707"
> +          ,(opam-repo "00706137074d536d2019d2d222fbe1bea929deda"
> +                      "1gv1vvmfscj7wirfv6qncp8pf81wygnpzjwd0lyqcxm7g8r8lb4w"))
> +         ("opam-repo-009e00fa"
> +          ,(opam-repo "009e00fa86300d11c311309a2544e5c6c3eb8de2"
> +                      "1wwy0rwrsjf4q10j1rh1dazk32fbzhzy6f7zl6qmndidx9b1bq7w"))
> +         ("opam-repo-7090735c"
> +          ,(opam-repo "7090735c9d1dd2dc481c4128c5ef4d3667238f15"
> +                      "1bccsgjhlp64lmvfjfn6viywf3x73ji75myg9ssf1ij1fkmabn0z"))
> +         ("opam-repo-a5d7cdc0"
> +          ,(opam-repo "a5d7cdc0c91452b0aef4fa71c331ee5237f6dddd"
> +                      "0z7kawqisy07088p5xjxwpvmvzlbj1d9cgdipsj90yx7nc5qh369"))
> +         ("opam-repo-ad4dd344"
> +          ,(opam-repo "ad4dd344fe5cd1cab49ced49d6758a9844549fb4"
> +                      "1a1qj47kj8xjdnc4zc50ijrix1kym1n7k20n3viki80a7518baw8"))
> +         ("opam-repo-c1842d168d"
> +          ,(opam-repo "c1842d168de956caf06d7ac8588e65020d7594d8"
> +                      "142y1ac7sprygyh91shcp0zcyfxjjkshi9g44qgg4rx60rbsbhai"))
> +         ("opam-repo-c1d23f0e"
> +          ,(opam-repo "c1d23f0e17ec83a036ebfbad1c78311b898a2ca0"
> +                      "0j9abisx3ifzm66ci3p45mngmz4f0fx7yd9jjxrz3f8w5jffc9ii"))
> +         ("opam-repo-f372039d"
> +          ,(opam-repo "f372039db86a970ef3e662adbfe0d4f5cd980701"
> +                      "0ld7fcry6ss6fmrpswvr6bikgx299w97h0gwrjjh7kd7rydsjdws"))
> +         ("opam-repo-11ea1cb"
> +          ,(opam-repo "11ea1cb6f2418b1f8a6679e4422771a04c9c3655"
> +                      "1s4p0wfn3bx97yvm8xvj3yhzv2pz0jwml68g2ybv37hj9mpbrsq0"))
> +         ("opam-repo-297366c"
> +          ,(opam-repo "297366cd01c3aaf29b967bf0b34ccc7989d4d5b3"
> +                      "1ysg69gys37nc2cxivs2ikh6xp0gj85if4rcrr874mqb9z12dm0j"))
> +         ("opam-repo-3235916"
> +          ,(opam-repo "3235916a162a59d7c82dac3fe24214975d48f1aa"
> +                      "1yf73rv2n740a4s9g7a9k4j91b4k7al88nwnw9cdw0k2ncbmr486"))
> +         ("opam-repo-de897adf36c4230dfea812f40c98223b31c4521a"
> +          ,(opam-repo "de897adf36c4230dfea812f40c98223b31c4521a"
> +                      "1m18x9gcwnbar8yv9sbfz8a3qpw412fp9cf4d6fb7syn0p0h96jw")))))
>      (inputs (list ocaml-opam-client))
>      (properties
>       ;; OPAM is used as a tool and not as a library, we can use the OCaml 4.14
> @@ -4409,8 +4423,7 @@ (define-public ocaml-base64
>                 (base32
>                  "068hwdbpl7vx9jjpxdc6a10zqd8xa55j3xx7ga6fnwrlfsbs2pjj"))))
>      (build-system dune-build-system)
> -    (native-inputs
> -     (list ocaml-alcotest ocaml-bos ocaml-rresult))
> +    (native-inputs (list ocaml-alcotest ocaml-bos ocaml-rresult))
>      (properties `((ocaml4.07-variant . ,(delay ocaml4.07-base64))))
>      (home-page "https://github.com/mirage/ocaml-base64")
>      (synopsis "Base64 encoding for OCaml")
> @@ -4419,6 +4432,14 @@ (define-public ocaml-base64
>  radix-64 representation.  It is specified in RFC 4648.")
>      (license license:isc)))
>  
> +;; A variant without tests that is used to prevent a cyclic dependency when
> +;; compiling ocaml-dose3.
> +(define ocaml-base64-boot
> +  (package
> +    (inherit ocaml-base64)
> +    (arguments `(#:tests? #f))
> +    (native-inputs '())))
> +
>  (define-public ocaml4.07-base64
>    (package-with-ocaml4.07
>      (package
> @@ -5291,27 +5312,22 @@ (define-public ocaml4.07-uuidm
>  (define-public ocaml-graph
>    (package
>      (name "ocaml-graph")
> -    (version "1.8.8")
> +    (home-page "https://github.com/backtracking/ocamlgraph/")
> +    (version "2.0.0")
>      (source (origin
> -              (method url-fetch)
> -              (uri (string-append "http://ocamlgraph.lri.fr/download/"
> -                                  "ocamlgraph-" version ".tar.gz"))
> +              (method git-fetch)
> +              (uri (git-reference
> +                     (url home-page)
> +                     (commit version)))
> +              (file-name (git-file-name name version))
>                (sha256
>                 (base32
> -                "0m9g16wrrr86gw4fz2fazrh8nkqms0n863w7ndcvrmyafgxvxsnr"))))
> -    (build-system ocaml-build-system)
> -    (arguments
> -     `(#:install-target "install-findlib"
> -       #:tests? #f
> -       #:phases
> -       (modify-phases %standard-phases
> -         (add-before 'configure 'set-shell
> -           (lambda* (#:key inputs #:allow-other-keys)
> -             (setenv "CONFIG_SHELL"
> -                     (search-input-file inputs "/bin/sh")))))))
> -    (inputs (list lablgtk))
> +                "1gjrsyyamvvn2rd9n9yjx6hsglhw0dbm4cgazq0dpx0bbr4inwc3"))))
> +    (build-system dune-build-system)
> +    (arguments `(#:package "ocamlgraph"))
> +    (propagated-inputs (list ocaml-stdlib-shims))
> +    (native-inputs (list ocaml-graphics))
>      (properties `((upstream-name . "ocamlgraph")))
> -    (home-page "https://ocamlgraph.lri.fr/")
>      (synopsis "Graph library for OCaml")
>      (description "OCamlgraph is a generic graph library for OCaml.")
>      (license license:lgpl2.1)))
> diff --git a/gnu/packages/patches/ocaml-dose3-Fix-for-ocaml-4.06.patch b/gnu/packages/patches/ocaml-dose3-Fix-for-ocaml-4.06.patch
> deleted file mode 100644
> index 2c344af821..0000000000
> --- a/gnu/packages/patches/ocaml-dose3-Fix-for-ocaml-4.06.patch
> +++ /dev/null
> @@ -1,52 +0,0 @@
> -From aeca7656f499d7f4595319858f242276920e31bb Mon Sep 17 00:00:00 2001
> -From: Louis Gesbert <louis.gesbert@ocamlpro.com>
> -Date: Sat, 2 Dec 2017 12:51:01 +0100
> -Subject: [PATCH] Fix for ocaml 4.06
> -
> ----
> - common/criteria_lexer.mll | 8 ++++----
> - common/util.ml            | 2 +-
> - 2 files changed, 5 insertions(+), 5 deletions(-)
> -
> -diff --git a/common/criteria_lexer.mll b/common/criteria_lexer.mll
> -index 71f9178..fc4eae3 100644
> ---- a/common/criteria_lexer.mll
> -+++ b/common/criteria_lexer.mll
> -@@ -18,7 +18,7 @@
> -     let c = Lexing.lexeme_char lexbuf 2 in (* the delimiter can be any character *)
> -     (* find the terminating delimiter *)
> -     let endpos =
> --      try String.index_from lexbuf.lex_buffer (lexbuf.lex_start_pos + 3) c with
> -+      try Bytes.index_from lexbuf.lex_buffer (lexbuf.lex_start_pos + 3) c with
> -       |Invalid_argument _ ->
> -           raise (Format822.Syntax_error (
> -             Format822.error lexbuf "String too short"))
> -@@ -27,9 +27,9 @@
> -             Format822.error lexbuf (Printf.sprintf "cannot find: %c" c)))
> -     in
> -     let len = endpos - (lexbuf.lex_start_pos + 3) in
> --    let s = String.sub lexbuf.lex_buffer (lexbuf.lex_start_pos + 3) len in
> --    lexbuf.Lexing.lex_curr_pos <- lexbuf.Lexing.lex_start_pos + ((String.length s)+4);
> --    s
> -+    let s = Bytes.sub lexbuf.lex_buffer (lexbuf.lex_start_pos + 3) len in
> -+    lexbuf.Lexing.lex_curr_pos <- lexbuf.Lexing.lex_start_pos + ((Bytes.length s)+4);
> -+    Bytes.to_string s
> - 
> - }
> - 
> -diff --git a/common/util.ml b/common/util.ml
> -index 598f266..36ca3d1 100644
> ---- a/common/util.ml
> -+++ b/common/util.ml
> -@@ -87,7 +87,7 @@ module MakeMessages(X : sig val label : string end) = struct
> -   let clean label =
> -     try 
> -       let s = Filename.chop_extension (Filename.basename label) in
> --      String.capitalize s
> -+      String.capitalize_ascii s
> -     with Invalid_argument _ -> label
> - 
> -   let create ?(enabled=false) label =
> --- 
> -2.11.0
> -
> diff --git a/gnu/packages/patches/ocaml-dose3-Install-mli-cmx-etc.patch b/gnu/packages/patches/ocaml-dose3-Install-mli-cmx-etc.patch
> deleted file mode 100644
> index 41494e7b3c..0000000000
> --- a/gnu/packages/patches/ocaml-dose3-Install-mli-cmx-etc.patch
> +++ /dev/null
> @@ -1,133 +0,0 @@
> -From b5314c20d8e3caf62fe0dc96ad937a2950158b23 Mon Sep 17 00:00:00 2001
> -From: Louis Gesbert <louis.gesbert@ocamlpro.com>
> -Date: Thu, 2 Mar 2017 12:19:56 +0100
> -Subject: [PATCH] Install mli, cmx, etc.
> -
> ----
> - Makefile | 26 +++++++++++++-------------
> - 1 file changed, 13 insertions(+), 13 deletions(-)
> -
> -diff --git a/Makefile b/Makefile
> -index 09464ff..5044d7f 100644
> ---- a/Makefile
> -+++ b/Makefile
> -@@ -56,7 +56,7 @@ $(DOSELIBS)/cudf.%:
> - 	@for i in _build/cudf/cudf.*; do \
> - 	  if [ -e $$i ]; then \
> - 	  cp $$i $(DOSELIBS) ; \
> --	  rm -f $(DOSELIBS)/*.mlpack $(DOSELIBS)/*.cmx ; \
> -+	  rm -f $(DOSELIBS)/*.mlpack ; \
> - 	  fi ; \
> - 	done
> - 
> -@@ -67,7 +67,7 @@ $(DOSELIBS)/common.%: common/*.ml common/*.mli
> - 	  if [ -e $$i ]; then \
> - 	  cp $$i $(DOSELIBS) ; \
> - 		rm $$i ;\
> --	  rm -f $(DOSELIBS)/*.mlpack $(DOSELIBS)/*.cmx ; \
> -+	  rm -f $(DOSELIBS)/*.mlpack ; \
> - 	  fi ; \
> - 	done
> - 
> -@@ -78,7 +78,7 @@ $(DOSELIBS)/versioning.%: versioning/*.ml versioning/*.mli
> - 	  if [ -e $$i ]; then \
> - 	  cp $$i $(DOSELIBS) ; \
> - 		rm $$i ;\
> --	  rm -f $(DOSELIBS)/*.mlpack $(DOSELIBS)/*.cmx ; \
> -+	  rm -f $(DOSELIBS)/*.mlpack ; \
> - 	  fi ; \
> - 	done
> - 
> -@@ -88,7 +88,7 @@ $(DOSELIBS)/algo.%: algo/*.ml algo/*.mli $(DOSELIBS)/common.%
> - 	  if [ -e $$i ]; then \
> - 	  cp $$i $(DOSELIBS) ; \
> - 		rm $$i ;\
> --	  rm -f $(DOSELIBS)/*.mlpack $(DOSELIBS)/*.cmx ; \
> -+	  rm -f $(DOSELIBS)/*.mlpack ; \
> - 	  fi ; \
> - 	done
> - 
> -@@ -98,7 +98,7 @@ $(DOSELIBS)/debian.%: deb/*.ml deb/*.mli $(DOSELIBS)/pef.%
> - 	  if [ -e $$i ]; then \
> - 	  cp $$i $(DOSELIBS) ; \
> - 		rm $$i ;\
> --	  rm -f $(DOSELIBS)/*.mlpack $(DOSELIBS)/*.cmx ; \
> -+	  rm -f $(DOSELIBS)/*.mlpack ; \
> - 	  fi ; \
> - 	done
> - 
> -@@ -108,7 +108,7 @@ $(DOSELIBS)/opam.%: opam/*.ml opam/*.mli $(DOSELIBS)/pef.%
> - 	  if [ -e $$i ]; then \
> - 	  cp $$i $(DOSELIBS) ; \
> - 		rm $$i ;\
> --	  rm -f $(DOSELIBS)/*.mlpack $(DOSELIBS)/*.cmx ; \
> -+	  rm -f $(DOSELIBS)/*.mlpack ; \
> - 	  fi ; \
> - 	done
> - 
> -@@ -118,7 +118,7 @@ $(DOSELIBS)/npm.%: npm/*.ml npm/*.mli $(DOSELIBS)/versioning.% $(DOSELIBS)/pef.%
> - 	  if [ -e $$i ]; then \
> - 	  cp $$i $(DOSELIBS) ; \
> - 		rm $$i ;\
> --	  rm -f $(DOSELIBS)/*.mlpack $(DOSELIBS)/*.cmx ; \
> -+	  rm -f $(DOSELIBS)/*.mlpack ; \
> - 	  fi ; \
> - 	done
> - 
> -@@ -128,7 +128,7 @@ $(DOSELIBS)/rpm.%: rpm/*.ml $(DOSELIBS)/algo.%
> - 	  if [ -e $$i ]; then \
> - 	  cp $$i $(DOSELIBS) ; \
> - 		rm $$i ;\
> --	  rm -f $(DOSELIBS)/*.mlpack $(DOSELIBS)/*.cmx ; \
> -+	  rm -f $(DOSELIBS)/*.mlpack ; \
> - 	  fi ; \
> - 	done
> - 
> -@@ -138,7 +138,7 @@ $(DOSELIBS)/pef.%: pef/*.ml pef/*.mli
> - 	  if [ -e $$i ]; then \
> - 	  cp $$i $(DOSELIBS) ; \
> - 		rm $$i ;\
> --	  rm -f $(DOSELIBS)/*.mlpack $(DOSELIBS)/*.cmx ; \
> -+	  rm -f $(DOSELIBS)/*.mlpack ; \
> - 	  fi ; \
> - 	done
> - 
> -@@ -148,7 +148,7 @@ $(DOSELIBS)/csw.%: opencsw/*.ml $(DOSELIBS)/versioning.%
> - 	  if [ -e $$i ]; then \
> - 	  cp $$i $(DOSELIBS) ; \
> - 		rm $$i ;\
> --	  rm -f $(DOSELIBS)/*.mlpack $(DOSELIBS)/*.cmx ; \
> -+	  rm -f $(DOSELIBS)/*.mlpack ; \
> - 	  fi ; \
> - 	done
> - 
> -@@ -158,7 +158,7 @@ $(DOSELIBS)/doseparse.%: $(DOSELIBS)/pef.% $(DOSELIBS)/debian.%
> - 	  if [ -e $$i ]; then \
> - 	  cp $$i $(DOSELIBS) ; \
> - 		rm $$i ;\
> --	  rm -f $(DOSELIBS)/*.mlpack $(DOSELIBS)/*.cmx $(DOSELIBS)/*.ml ; \
> -+	  rm -f $(DOSELIBS)/*.mlpack $(DOSELIBS)/*.ml ; \
> - 	  fi ; \
> - 	done
> - 
> -@@ -168,7 +168,7 @@ $(DOSELIBS)/doseparseNoRpm.%: $(DOSELIBS)/pef.% $(DOSELIBS)/debian.%
> - 	  if [ -e $$i ]; then \
> - 			cp $$i $(DOSELIBS) ;\
> - 			rm $$i ;\
> --			rm -f $(DOSELIBS)/*.mlpack $(DOSELIBS)/*.cmx ;\
> -+			rm -f $(DOSELIBS)/*.mlpack ;\
> - 	  fi ; \
> - 	done
> - 
> -@@ -223,7 +223,7 @@ INSTALL_STUFF_ = META
> - INSTALL_STUFF_ += $(wildcard _build/doselibs/*.cma _build/doselibs/*.cmi)
> - INSTALL_STUFF_ += $(wildcard _build/doselibs/*.cmxa _build/doselibs/*.cmxs)
> - INSTALL_STUFF_ += $(wildcard _build/doselibs/*.a)
> --#INSTALL_STUFF_ += $(wildcard _build/*/*.mli)
> -+INSTALL_STUFF_ += $(wildcard _build/doselibs/*.mli) $(wildcard _build/doselibs/*.cmti) $(wildcard _build/doselibs/*.cmx)
> - INSTALL_STUFF_ += $(wildcard _build/rpm/*.so)
> - 
> - exclude_cudf = $(wildcard _build/doselibs/*cudf* _build/cudf/*)
> --- 
> -2.11.0
> -
> diff --git a/gnu/packages/patches/ocaml-dose3-add-unix-dependency.patch b/gnu/packages/patches/ocaml-dose3-add-unix-dependency.patch
> deleted file mode 100644
> index d2cc44c784..0000000000
> --- a/gnu/packages/patches/ocaml-dose3-add-unix-dependency.patch
> +++ /dev/null
> @@ -1,25 +0,0 @@
> -From b94cf24739818e5aff397e0a83b19ea32dc81f42 Mon Sep 17 00:00:00 2001
> -From: Louis Gesbert <louis.gesbert@ocamlpro.com>
> -Date: Tue, 6 Feb 2018 10:15:45 +0100
> -Subject: [PATCH 3/3] Add "unix" as dependency to dose3.common in META.in
> -
> ----
> - META.in | 2 +-
> - 1 file changed, 1 insertion(+), 1 deletion(-)
> -
> -diff --git a/META.in b/META.in
> -index aa2cd8d..0f9d337 100644
> ---- a/META.in
> -+++ b/META.in
> -@@ -8,7 +8,7 @@ package "common" (
> - version = "@PACKAGE_VERSION@"
> - archive(byte) = "common.cma"
> - archive(native) = "common.cmxa"
> --requires = "extlib, re.pcre, cudf, @ZIP@, @BZ2@"
> -+requires = "extlib, re.pcre, cudf, unix, @ZIP@, @BZ2@"
> - )
> - 
> - package "algo" (
> --- 
> -2.11.0
> -
> diff --git a/gnu/packages/patches/ocaml-dose3-dont-make-printconf.patch b/gnu/packages/patches/ocaml-dose3-dont-make-printconf.patch
> deleted file mode 100644
> index 84b6a3b81b..0000000000
> --- a/gnu/packages/patches/ocaml-dose3-dont-make-printconf.patch
> +++ /dev/null
> @@ -1,9 +0,0 @@
> ---- a/configure
> -+++ b/configure
> -@@ -6552,6 +6552,3 @@ if test -n "$ac_unrecognized_opts" && test "$enable_option_checking" != no; then
> -   { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: unrecognized options: $ac_unrecognized_opts" >&5
> - $as_echo "$as_me: WARNING: unrecognized options: $ac_unrecognized_opts" >&2;}
> - fi
> --
> --
> --make printconf
> -- 
> 2.41.0
> 
> 
> 
> 

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