From mboxrd@z Thu Jan 1 00:00:00 1970 Received: from eggs.gnu.org ([2001:470:142:3::10]:52676) by lists.gnu.org with esmtp (Exim 4.86_2) (envelope-from ) id 1hqOD5-0002ir-Sz for guix-patches@gnu.org; Wed, 24 Jul 2019 16:50:04 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1hqOD4-0004bq-OK for guix-patches@gnu.org; Wed, 24 Jul 2019 16:50:03 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:57527) by eggs.gnu.org with esmtps (TLS1.0:RSA_AES_128_CBC_SHA1:16) (Exim 4.71) (envelope-from ) id 1hqOD4-0004bm-Kx for guix-patches@gnu.org; Wed, 24 Jul 2019 16:50:02 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1hqOD4-0005uo-Gp for guix-patches@gnu.org; Wed, 24 Jul 2019 16:50:02 -0400 Subject: [bug#36800] [PATCH 11/11] gnu: Add r-depecher. Resent-Message-ID: References: <20190724182204.6818-1-zimon.toutoune@gmail.com> <20190724182204.6818-12-zimon.toutoune@gmail.com> From: Ricardo Wurmus In-reply-to: <20190724182204.6818-12-zimon.toutoune@gmail.com> Date: Wed, 24 Jul 2019 22:49:44 +0200 Message-ID: <87v9vr9mzb.fsf@elephly.net> MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+kyle=kyleam.com@gnu.org Sender: "Guix-patches" To: 36800@debbugs.gnu.org zimoun writes: > * gnu/packages/bioconductor.scm (r-depecher): New variable. This package cannot actually be built: --8<---------------cut here---------------start------------->8--- =E2=80=A6 if test -e "/usr/bin/strip" & test -e "/bin/uname" & [[ `uname` =3D=3D "Lin= ux" ]] ; then /usr/bin/strip --strip-debug DepecheR.so; fi /gnu/store/q19l04vd2za80mk1845pz7r8cz29qk43-bash-minimal-4.4.23/bin/bash: /= usr/bin/strip: No such file or directory make: *** [Makevars:6: strippedLib] Error 127 ERROR: compilation failed for package =E2=80=98DepecheR=E2=80=99 * removing =E2=80=98/gnu/store/pgjzdxwn0nyanx9lvp6i9rxflabh3k21-r-depecher-= 1.0.3/site-library/DepecheR=E2=80=99 Backtrace: 4 (primitive-load "/gnu/store/f1ky8a22c7s5p053nci05a536j7=E2=80= =A6") In ice-9/eval.scm: 191:35 3 (_ #f) In srfi/srfi-1.scm: 863:16 2 (every1 # =E2=80=A6) In /gnu/store/4p2vk30zhkwxqdkydn1572qz70jgvl55-module-import/guix/build/gnu= -build-system.scm: 799:28 1 (_ _) In /gnu/store/4p2vk30zhkwxqdkydn1572qz70jgvl55-module-import/guix/build/uti= ls.scm: 616:6 0 (invoke _ . _) /gnu/store/4p2vk30zhkwxqdkydn1572qz70jgvl55-module-import/guix/build/utils.= scm:616:6: In procedure invoke: Throw to key `srfi-34' with args `(#)'. builder for `/gnu/store/mwcdvlm6f17i81m16w131042cmvlfh5m-r-depecher-1.0.3.d= rv' failed with exit code 1 build of /gnu/store/mwcdvlm6f17i81m16w131042cmvlfh5m-r-depecher-1.0.3.drv f= ailed View build log at '/var/log/guix/drvs/mw/cdvlm6f17i81m16w131042cmvlfh5m-r-d= epecher-1.0.3.drv.bz2'. guix build: error: build of `/gnu/store/mwcdvlm6f17i81m16w131042cmvlfh5m-r-= depecher-1.0.3.drv' failed --8<---------------cut here---------------end--------------->8--- I=E2=80=99ll modify the build phases to patch out this call to /usr/bin/str= ip. --=20 Ricardo