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From: ludo@gnu.org (Ludovic Courtès)
To: Fis Trivial <ybbs.daans@hotmail.com>
Cc: 30229@debbugs.gnu.org
Subject: bug#30229: Python modules installed by pip in virtualenv can't find shared objects.
Date: Wed, 24 Jan 2018 16:01:42 +0100	[thread overview]
Message-ID: <87k1w7xpux.fsf@gnu.org> (raw)
In-Reply-To: <MWHPR16MB0063656F9561DCD3EF12634592E30@MWHPR16MB0063.namprd16.prod.outlook.com> (Fis Trivial's message of "Tue, 23 Jan 2018 11:49:59 +0000")

Hi,

Fis Trivial <ybbs.daans@hotmail.com> skribis:

> In my case, it's lightgbm (installed by pip), needs libgomp.so from gcc:lib for
> openmp support. Here is the backtrace:
>
> Traceback (most recent call last):
>   File "ex1.py", line 5, in <module>
>     import lightgbm as lgb
>   File "/home/fis/Workspace/tianchi/medical_treatment/lib/python3.5/site-packages/lightgbm/__init__.py", line 8, in <module>
>     from .basic import Booster, Dataset
>   File "/home/fis/Workspace/tianchi/medical_treatment/lib/python3.5/site-packages/lightgbm/basic.py", line 32, in <module>
>     _LIB = _load_lib()
>   File "/home/fis/Workspace/tianchi/medical_treatment/lib/python3.5/site-packages/lightgbm/basic.py", line 27, in _load_lib
>     lib = ctypes.cdll.LoadLibrary(lib_path[0])
>   File "/gnu/store/jb3n0bsdpkhvyb8y70jyr8fcx8fqssr9-python-3.5.3/lib/python3.5/ctypes/__init__.py", line 425, in LoadLibrary
>     return self._dlltype(name)
>   File "/gnu/store/jb3n0bsdpkhvyb8y70jyr8fcx8fqssr9-python-3.5.3/lib/python3.5/ctypes/__init__.py", line 347, in __init__
>     self._handle = _dlopen(self._name, mode)
> OSError: libgomp.so.1: cannot open shared object file: No such file or directory

I’d suggest hard-coding the absolute file name of libgomp.so.1 in
lightgbm/basic.py.

This is what we do, for instance, for Guile packages that use the
foreign function interface (FFI) and dynamically load shared libraries
(see ‘guile-gdbm-ffi’ as an example.)

HTH,
Ludo’.

      parent reply	other threads:[~2018-01-24 15:02 UTC|newest]

Thread overview: 6+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2018-01-23 11:49 bug#30229: Python modules installed by pip in virtualenv can't find shared objects Fis Trivial
2018-01-23 12:00 ` Ricardo Wurmus
2018-01-23 13:21   ` Fis Trivial
2021-11-24 23:39   ` zimoun
2022-01-13 14:59     ` zimoun
2018-01-24 15:01 ` Ludovic Courtès [this message]

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