From mboxrd@z Thu Jan 1 00:00:00 1970 From: Maxim Cournoyer Subject: bug#34935: nanopolish is not reproducible Date: Wed, 20 Mar 2019 23:11:41 -0400 Message-ID: <87imwc6hw2.fsf@gmail.com> Mime-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable Return-path: Received: from eggs.gnu.org ([209.51.188.92]:51266) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1h6o7j-0001m0-CB for bug-guix@gnu.org; Wed, 20 Mar 2019 23:12:08 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1h6o7g-0007Kb-D7 for bug-guix@gnu.org; Wed, 20 Mar 2019 23:12:06 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:39053) by eggs.gnu.org with esmtps (TLS1.0:RSA_AES_128_CBC_SHA1:16) (Exim 4.71) (envelope-from ) id 1h6o7e-0007J4-ID for bug-guix@gnu.org; Wed, 20 Mar 2019 23:12:02 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1h6o7e-0003WC-BP for bug-guix@gnu.org; Wed, 20 Mar 2019 23:12:02 -0400 Sender: "Debbugs-submit" Resent-Message-ID: Received: from eggs.gnu.org ([209.51.188.92]:51224) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1h6o7O-0001ic-Ly for bug-guix@gnu.org; Wed, 20 Mar 2019 23:11:47 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1h6o7N-0007Ag-Ly for bug-guix@gnu.org; Wed, 20 Mar 2019 23:11:46 -0400 Received: from mail-io1-xd32.google.com ([2607:f8b0:4864:20::d32]:38279) by eggs.gnu.org with esmtps (TLS1.0:RSA_AES_128_CBC_SHA1:16) (Exim 4.71) (envelope-from ) id 1h6o7N-00079T-9x for bug-guix@gnu.org; Wed, 20 Mar 2019 23:11:45 -0400 Received: by mail-io1-xd32.google.com with SMTP id v4so4088598ioj.5 for ; Wed, 20 Mar 2019 20:11:45 -0700 (PDT) Received: from kwak ([2607:f2c0:94b4:fa00::235]) by smtp.gmail.com with ESMTPSA id 134sm2031868itx.29.2019.03.20.20.11.42 for (version=TLS1_2 cipher=ECDHE-RSA-CHACHA20-POLY1305 bits=256/256); Wed, 20 Mar 2019 20:11:42 -0700 (PDT) List-Id: Bug reports for GNU Guix List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: bug-guix-bounces+gcggb-bug-guix=m.gmane.org@gnu.org Sender: "bug-Guix" To: 34935@debbugs.gnu.org $ guix build --check --no-grafts nanopolish [...] guix build: error: derivation `/gnu/store/7hzcmcwlw83f0wsqmz9nnl1ah54kwks4-= nanopolish-0.10.2-1.50e8b5c.drv' may not be deterministic: output `/gnu/sto= re/m7icaq7642zy0gvnqvymcnn8d088a9s0-nanopolish-0.10.2-1.50e8b5c' differs $ diffoscope "$(guix build nanopolish)" /gnu/store/m7icaq7642zy0gvnqvymcnn8= d088a9s0-nanopolish-0.10.2-1.50e8b5c --8<---------------cut here---------------start------------->8--- =E2=94=82 =E2=94=82 =E2=94=82 - 0x000000000000001d (RUNPATH) Lib= rary runpath: [/gnu/store/h90vnqw0nwd0hhm1l5dgxsdrigddfmq4-glibc-2.28/lib:/= gnu/store/4sqps8dczv3g7rwbdibfz6rf5jlk7w90-gcc-5.5.0-lib/lib:/gnu/store/nq4= lsyipmfb0q7g26ra45rwwqrh3x8zw-zlib-1.2.11/lib:/gnu/store/36i633snnhx4mgbnmm= 5rbkgk3qdi32ka-hdf5-1.8.21/lib:/gnu/store/x4xpcpsqmini25gkrc0h945ml9r609v5-= htslib-1.9/lib:/gnu/store/4sqps8dczv3g7rwbdibfz6rf5jlk7w90-gcc-5.5.0-lib/li= b/gcc/x86_64-unknown-linux-gnu/5.5.0/../../..] =E2=94=82 =E2=94=82 =E2=94=82 + 0x000000000000001d (RUNPATH) Lib= rary runpath: [/gnu/store/h90vnqw0nwd0hhm1l5dgxsdrigddfmq4-glibc-2.28/lib:/= gnu/store/4sqps8dczv3g7rwbdibfz6rf5jlk7w90-gcc-5.5.0-lib/lib:/gnu/store/nq4= lsyipmfb0q7g26ra45rwwqrh3x8zw-zlib-1.2.11/lib:/gnu/store/36i633snnhx4mgbnmm= 5rbkgk3qdi32ka-hdf5-1.8.21/lib:/gnu/store/d25i834bs8wvg8mh36bplxg61r6b7vz9-= htslib-1.9/lib:/gnu/store/4sqps8dczv3g7rwbdibfz6rf5jlk7w90-gcc-5.5.0-lib/li= b/gcc/x86_64-unknown-linux-gnu/5.5.0/../../..] --8<---------------cut here---------------end--------------->8--- The problem seems to lie in htslib.