From mboxrd@z Thu Jan 1 00:00:00 1970 From: Roel Janssen Subject: [PATCH 6/7] gnu: Add r-getopt. * gnu/packages/bioinformatics.scm (r-getopt): New variable. --- gnu/packages/bioinformatics.scm | 22 ++++++++++++++++++++++ 1 file changed, 22 insertions(+) Date: Thu, 15 Sep 2016 13:38:57 +0200 Message-ID: <87d1k5s88e.fsf@gnu.org> Mime-Version: 1.0 Content-Type: text/plain Return-path: Received: from eggs.gnu.org ([2001:4830:134:3::10]:34207) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1bkUzd-0002Oh-RH for guix-devel@gnu.org; Thu, 15 Sep 2016 07:38:18 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1bkUzb-00059P-SS for guix-devel@gnu.org; Thu, 15 Sep 2016 07:38:12 -0400 Received: from fencepost.gnu.org ([2001:4830:134:3::e]:34689) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1bkUzb-00058m-Op for guix-devel@gnu.org; Thu, 15 Sep 2016 07:38:11 -0400 Received: from ip-80-113-14-101.ip.prioritytelecom.net ([80.113.14.101]:12033 helo=roel-tp) by fencepost.gnu.org with esmtpsa (TLS1.2:RSA_AES_256_CBC_SHA1:256) (Exim 4.82) (envelope-from ) id 1bkUza-0005uU-3S for guix-devel@gnu.org; Thu, 15 Sep 2016 07:38:10 -0400 List-Id: "Development of GNU Guix and the GNU System distribution." List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-devel-bounces+gcggd-guix-devel=m.gmane.org@gnu.org Sender: "Guix-devel" To: guix-devel@gnu.org diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index af32d66..902d1d2 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -5404,6 +5404,28 @@ functionality.") scripts that accept short and long flag/options.") (license license:gpl2+))) +(define-public r-getopt + (package + (name "r-getopt") + (version "1.20.0") + (source + (origin + (method url-fetch) + (uri (cran-uri "getopt" version)) + (sha256 + (base32 + "00f57vgnzmg7cz80rjmjz1556xqcmx8nhrlbbhaq4w7gl2ibl87r")))) + (build-system r-build-system) + (home-page "https://github.com/trevorld/getopt") + (synopsis "C-like getopt behavior") + (description + "Package designed to be used with Rscript to write ``#!'' shebang +scripts that accept short and long flags/options. Many users will prefer +using instead the packages optparse or argparse which add extra features +like automatically generated help option and usage, support for default +values, positional argument support, etc.") + (license license:gpl2+))) + (define-public r-dnacopy (package (name "r-dnacopy") -- 2.10.0