From: ludo@gnu.org (Ludovic Courtès)
To: Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de>
Cc: guix-devel@gnu.org
Subject: Re: [PATCH] gnu: Add samtools
Date: Thu, 11 Dec 2014 18:57:38 +0100 [thread overview]
Message-ID: <878uie6pd9.fsf@gnu.org> (raw)
In-Reply-To: <idj61dikz76.fsf@bimsb-sys02.mdc-berlin.net> (Ricardo Wurmus's message of "Thu, 11 Dec 2014 15:48:22 +0100")
Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de> skribis:
> * gnu/packages/bioinformatics.scm: New file
> * gnu-system.am (GNU_SYSTEM_MODULES): Add it
Perfect!
[...]
> + (synopsis "Efficient utilities on manipulating alignments in the SAM format")
What about “Utilities to manipulate nucleotide sequence alignments”, to
make it clearer that it’s bioinfo-related?
> + (description
> + "Samtools implements various utilities for post-processing alignments in
> +the SAM, BAM, and CRAM formats, including indexing, variant calling (in
> +conjunction with bcftools), and a simple alignment viewer.")
Likewise, maybe replace “alignments” with “nucleotide sequence
alignments” or something to that effect?
Thank you!
Ludo’.
next prev parent reply other threads:[~2014-12-11 17:57 UTC|newest]
Thread overview: 11+ messages / expand[flat|nested] mbox.gz Atom feed top
2014-12-11 14:48 [PATCH] gnu: Add samtools Ricardo Wurmus
2014-12-11 17:57 ` Ludovic Courtès [this message]
2014-12-12 9:48 ` Ricardo Wurmus
2014-12-12 22:55 ` Ludovic Courtès
2014-12-13 6:30 ` Mark H Weaver
2014-12-13 8:19 ` Ricardo Wurmus
2014-12-13 15:53 ` Ludovic Courtès
2014-12-13 16:30 ` Mark H Weaver
2014-12-13 17:04 ` Mark H Weaver
2014-12-15 11:36 ` Ricardo Wurmus
2014-12-15 22:12 ` Ludovic Courtès
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