Re: [PATCH] gnu: Add TopHat.

[Ricardo Wurmus <rekado@elephly.net>]

Ludovic Courtès <ludo@gnu.org> writes:

> Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de> skribis:
>
>> +    (synopsis "Spliced read mapper for RNA-Seq")
>> +    (description
>> +     "TopHat is a fast splice junction mapper for RNA-Seq reads.  It aligns
>
> It would be nice to contextualize a bit, for instance by adding a word
> after “RNA-Seq”, like:
>
>   … for RNA-Seq bioinformatics foobars
>
> or:
>
>   … for the RNA-Seq bioinformatics thingie
>
> Something like that.  :-)

I changed it to “for RNA-Seq data” in the synopsis and “for nucleotide
sequence reads produced by the RNA-Seq method” in the description.
That’s probably a little clunky for bioinformaticians but I hope it’s a
little less dense for everyone else.

>
>> +    ;; TopHat is released under the Boost Software License, Version 1.0
>> +    ;; See https://github.com/infphilo/tophat/issues/11#issuecomment-121589893
>> +    (license (license:x11-style "http://www.boost.org/LICENSE_1_0.txt"
>> +                                "Some components have other similar licences."))))
>
> You can use ‘license:boost1.0’ here.

Done.  Thanks for the suggestions!

~~ Ricardo