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From: ludo@gnu.org (Ludovic Courtès)
To: Ben Woodcroft <donttrustben@gmail.com>
Cc: guix-devel@gnu.org,
	Alex Sassmannshausen <alex.sassmannshausen@gmail.com>
Subject: Re: PATCH [0/22]: Add roary.
Date: Sun, 31 Jul 2016 13:26:39 +0200	[thread overview]
Message-ID: <877fc26ob4.fsf@gnu.org> (raw)
In-Reply-To: <20160727125423.7768-1-donttrustben@gmail.com> (Ben Woodcroft's message of "Wed, 27 Jul 2016 22:54:01 +1000")

Hello,

Ben Woodcroft <donttrustben@gmail.com> skribis:

> This patchset adds roary, a pipeline which at times is used for tracking
> outbreaks of pathogenic bacteria in e.g. foodstuffs or hospitals, by comparing
> whole genome sequences.

I looked briefly at this series and I guess you can take into account
Leo’s comments and the push.

> perl-log-log4perl was already discussed previously and I am happy to
> defer to that patch.  I only include mine here so the packages build.
> https://lists.gnu.org/archive/html/guix-devel/2016-07/msg00624.html

Alex, have you pushed it yet?

Thank you Ben for this heroic packaging effort!  :-)

Ludo’.

  parent reply	other threads:[~2016-07-31 11:26 UTC|newest]

Thread overview: 29+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2016-07-27 12:54 PATCH [0/22]: Add roary Ben Woodcroft
2016-07-27 12:54 ` [PATCH 01/22] gnu: parallel: Use full paths for executables Ben Woodcroft
2016-07-27 12:54   ` [PATCH 02/22] gnu: Add perl-xml-writer Ben Woodcroft
2016-07-27 12:54   ` [PATCH 03/22] gnu: Add perl-parse-yapp Ben Woodcroft
2016-07-27 12:54   ` [PATCH 04/22] gnu: Add perl-graph Ben Woodcroft
2016-07-27 12:54   ` [PATCH 05/22] gnu: Add perl-graph-readwrite Ben Woodcroft
2016-07-27 12:54   ` [PATCH 06/22] gnu: Add perl-log-log4perl Ben Woodcroft
2016-07-27 12:54   ` [PATCH 07/22] gnu: Add perl-file-slurper Ben Woodcroft
2016-07-27 12:54   ` [PATCH 08/22] gnu: Add perl-file-path Ben Woodcroft
2016-07-27 12:54   ` [PATCH 09/22] gnu: Add perl-file-grep Ben Woodcroft
2016-07-27 12:54   ` [PATCH 10/22] gnu: Add perl-array-utils Ben Woodcroft
2016-07-27 12:54   ` [PATCH 11/22] gnu: Add perl-test-files Ben Woodcroft
2016-07-27 12:54   ` [PATCH 12/22] gnu: Add perl-env-path Ben Woodcroft
2016-07-27 12:54   ` [PATCH 13/22] gnu: Add mcl Ben Woodcroft
2016-07-28 22:20     ` Leo Famulari
2016-07-27 12:54   ` [PATCH 14/22] gnu: Add bpp-core Ben Woodcroft
2016-07-27 12:54   ` [PATCH 15/22] gnu: Add bpp-seq Ben Woodcroft
2016-07-27 12:54   ` [PATCH 16/22] gnu: Add bpp-phyl Ben Woodcroft
2016-07-27 12:54   ` [PATCH 17/22] gnu: Add bpp-popgen Ben Woodcroft
2016-07-27 12:54   ` [PATCH 18/22] gnu: Add bppsuite Ben Woodcroft
2016-07-27 12:54   ` [PATCH 19/22] gnu: Add exonerate Ben Woodcroft
2016-07-28 22:22     ` Leo Famulari
2016-07-27 12:54   ` [PATCH 20/22] gnu: Add prank Ben Woodcroft
2016-07-27 12:54   ` [PATCH 21/22] gnu: Add raxml Ben Woodcroft
2016-07-27 12:54   ` [PATCH 22/22] gnu: Add roary Ben Woodcroft
2016-07-29 21:07     ` Leo Famulari
2016-07-28 22:31   ` [PATCH 01/22] gnu: parallel: Use full paths for executables Leo Famulari
2016-07-31 11:26 ` Ludovic Courtès [this message]
2016-08-08 12:16   ` PATCH [0/22]: Add roary Ben Woodcroft

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