From mboxrd@z Thu Jan 1 00:00:00 1970 From: ludo@gnu.org (Ludovic =?utf-8?Q?Court=C3=A8s?=) Subject: Re: Guix on clusters and in HPC Date: Thu, 03 Nov 2016 14:47:45 +0100 Message-ID: <877f8kvfni.fsf@gnu.org> References: <87r37divr8.fsf@gnu.org> <8737jteh8z.fsf@gnu.org> <871szbazaa.fsf@gnu.org> <8760omujwc.fsf@elephly.net> <874m3zuy52.fsf@gnu.org> <9d899b54-934f-e98b-2464-8ccc2f8115c7@uq.edu.au> Mime-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable Return-path: Received: from eggs.gnu.org ([2001:4830:134:3::10]:55370) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1c2IMy-0003z7-M8 for guix-devel@gnu.org; Thu, 03 Nov 2016 09:47:56 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1c2IMu-0002oC-DH for guix-devel@gnu.org; Thu, 03 Nov 2016 09:47:52 -0400 In-Reply-To: <9d899b54-934f-e98b-2464-8ccc2f8115c7@uq.edu.au> (Ben Woodcroft's message of "Wed, 2 Nov 2016 09:25:42 +1000") List-Id: "Development of GNU Guix and the GNU System distribution." List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-devel-bounces+gcggd-guix-devel=m.gmane.org@gnu.org Sender: "Guix-devel" To: Ben Woodcroft Cc: Guix-devel Ben Woodcroft skribis: > Has anyone ever managed to get Guix to work inside docker? I attempted > it as I intend on submitting some applications to kbase[0,1], where > developers submit docker files to run their applications within the > "narrative" interface i.e. web-facing interfaces to bioinformatic > tools. I failed I think because of docker's single-process > restriction. Using the attached (straightforward) dockerfile it fails > at this step: > > RUN echo "nohup ~root/.guix-profile/bin/guix-daemon > --build-users-group=3Dguixbuild &" > /tmp/daemon-script.sh > RUN bash /tmp/daemon-script.sh; guix pull > ... > guix pull: error: build failed: cloning builder process: Operation not > permitted That means that the clone(2) call in nix/libstore/build.cc failed, most likely because one of the CLONE_NEW* flags isn=E2=80=99t supported by the k= ernel you=E2=80=99re running. What version of Linux is it? Thanks, Ludo=E2=80=99.