From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from mp12.migadu.com ([2001:41d0:8:6d80::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by ms0.migadu.com with LMTPS id uGeRCPIhUGKObwAAgWs5BA (envelope-from ) for ; Fri, 08 Apr 2022 13:52:18 +0200 Received: from aspmx1.migadu.com ([2001:41d0:8:6d80::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by mp12.migadu.com with LMTPS id eA0bBfIhUGKUGAAAauVa8A (envelope-from ) for ; Fri, 08 Apr 2022 13:52:18 +0200 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by aspmx1.migadu.com (Postfix) with ESMTPS id B8E0F3DBBF for ; Fri, 8 Apr 2022 13:52:17 +0200 (CEST) Received: from localhost ([::1]:59974 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1ncnA0-0002MN-CT for larch@yhetil.org; Fri, 08 Apr 2022 07:52:16 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:37744) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1ncn9m-0002IJ-Hf for bug-guix@gnu.org; Fri, 08 Apr 2022 07:52:02 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:40161) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1ncn9m-0001pE-8t for bug-guix@gnu.org; Fri, 08 Apr 2022 07:52:02 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1ncn9m-0003El-4s; Fri, 08 Apr 2022 07:52:02 -0400 X-Loop: help-debbugs@gnu.org Subject: bug#54787: importer Bioconductor: no tarball, only Git Resent-From: zimoun Original-Sender: "Debbugs-submit" Resent-CC: rekado@elephly.net, bug-guix@gnu.org Resent-Date: Fri, 08 Apr 2022 11:52:01 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: report 54787 X-GNU-PR-Package: guix X-GNU-PR-Keywords: To: 54787@debbugs.gnu.org X-Debbugs-Original-To: Bug Guix X-Debbugs-Original-Xcc: Ricardo Wurmus Received: via spool by submit@debbugs.gnu.org id=B.164941871812430 (code B ref -1); Fri, 08 Apr 2022 11:52:01 +0000 Received: (at submit) by debbugs.gnu.org; 8 Apr 2022 11:51:58 +0000 Received: from localhost ([127.0.0.1]:34057 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1ncn9h-0003EQ-SO for submit@debbugs.gnu.org; Fri, 08 Apr 2022 07:51:58 -0400 Received: from lists.gnu.org ([209.51.188.17]:47156) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1ncn9f-0003EI-GF for submit@debbugs.gnu.org; Fri, 08 Apr 2022 07:51:55 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:37738) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1ncn9f-00027Y-8U for bug-guix@gnu.org; Fri, 08 Apr 2022 07:51:55 -0400 Received: from mail-wr1-x42d.google.com ([2a00:1450:4864:20::42d]:46837) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1ncn9d-0001oP-Kp for bug-guix@gnu.org; Fri, 08 Apr 2022 07:51:54 -0400 Received: by mail-wr1-x42d.google.com with SMTP id v2so1589655wrv.13 for ; Fri, 08 Apr 2022 04:51:53 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20210112; h=from:to:subject:date:message-id:mime-version; bh=CbvDk3xh5EqOZsCZ08RcHjXl3tne+c0vkY/OIMfHsRM=; b=N9ta99EiCWyhqkFKftOufAfDDuNYIzAyGLERf7YSotawN2BVvQO6EgkoPKq6hOLnWb 3n4T/fSBhsQ176NNsBjrQ24wKc4inwEInCQpTwEcbJqDWjBkD1mmVlIRIc20Hp2dY+jq Y1qM5f3qDtdDKP+nXzEEie5l1oXTBZCkD1W5X9TJSt50mHLa9enAbT3nJpuYYweBAspO Mxg3RgmmXtP89TqLxodnw28b3yDIzjjMBjS8s6RaBJeN0gJgKrUaDSUFLr9dEJZZsP6h u9V2DKOLq+p8/1sK8kN4xDAMI0CyokBcpnqzVg//vcmfNQMaLClxDOx8uvLfFuf90Nml pE6g== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20210112; h=x-gm-message-state:from:to:subject:date:message-id:mime-version; bh=CbvDk3xh5EqOZsCZ08RcHjXl3tne+c0vkY/OIMfHsRM=; b=MA4MRJwJYbh8KFej8Cgi9w7bpyztVQViuzJvEJYeKmDIhomk8XAIVxJxHv0iukkJsd 95LEdyrTXWjophJbdzCSVAzzUX55HxpfSW79J6umeFB6hnSGW/caW6G3KWXAHax/Je4i 5zwPWnu4gUw9SZSV/7V0+tqNzwwPcu+KtE2Y3ULtx4GV069JNaXETFcBvzql4LZ23KUP N9rh3U7UJf8JryrrwOCmO3NAvO00p95MGLxy3uiYGYYUxTK7DYdfvPJiOmxc6Fnir57j tdnMbcIIsglZQ/ybQYFPHbryqPTtiIFMjQtko8j0T6/V8KKdsPIv/OiblPU6mm6xXTes 4XqQ== X-Gm-Message-State: AOAM531uonMiNKjENoPMARZUDnG050g9jC5leEEDD3UOPHXk41XW2nvt FuOU/qEh9H+8PNhln93dYkdIe6zw1hI= X-Google-Smtp-Source: ABdhPJyQTIuy4tx7Nw5ZYsE4hoDNtqZEy2iokUrBDfMBmt0lttcMVBBDNyfKVaz/dkTk8E5F9YoXEw== X-Received: by 2002:a5d:47a1:0:b0:204:9f5:e72f with SMTP id 1-20020a5d47a1000000b0020409f5e72fmr14998405wrb.656.1649418711664; Fri, 08 Apr 2022 04:51:51 -0700 (PDT) Received: from lili ([88.126.110.68]) by smtp.gmail.com with ESMTPSA id o9-20020a056000010900b00206186ac25esm10942822wrx.12.2022.04.08.04.51.51 for (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Fri, 08 Apr 2022 04:51:51 -0700 (PDT) From: zimoun Date: Fri, 08 Apr 2022 13:48:58 +0200 Message-ID: <868rsf23th.fsf@gmail.com> MIME-Version: 1.0 Content-Type: text/plain Received-SPF: pass client-ip=2a00:1450:4864:20::42d; envelope-from=zimon.toutoune@gmail.com; helo=mail-wr1-x42d.google.com X-Spam_score_int: -20 X-Spam_score: -2.1 X-Spam_bar: -- X-Spam_report: (-2.1 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, FREEMAIL_FROM=0.001, RCVD_IN_DNSWL_NONE=-0.0001, SPF_HELO_NONE=0.001, SPF_PASS=-0.001, T_SCC_BODY_TEXT_LINE=-0.01 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: bug-guix@gnu.org List-Id: Bug reports for GNU Guix List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Cc: Ricardo Wurmus Errors-To: bug-guix-bounces+larch=yhetil.org@gnu.org Sender: "bug-Guix" X-Migadu-Flow: FLOW_IN X-Migadu-To: larch@yhetil.org X-Migadu-Country: US ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=yhetil.org; s=key1; t=1649418737; h=from:from:sender:sender:reply-to:subject:subject:date:date: message-id:message-id:to:to:cc:cc:mime-version:mime-version: content-type:content-type:resent-cc:resent-from:resent-sender: resent-message-id:list-id:list-help:list-unsubscribe:list-subscribe: list-post:dkim-signature; bh=CbvDk3xh5EqOZsCZ08RcHjXl3tne+c0vkY/OIMfHsRM=; b=kdT2QyXeAPcKPYlRGVYzsIfjGAxseP2w9Sm52IrhrWg74krgXC9gnE0tLYa21FlVt/f2MK 6tqE4IipWA3ULRkJJHP7MTmYG/89okE9au1p9YnKllsq2M3JJEOqfL6I5ge7BGyfDbPoWQ OeoUGUWy2xZlG/yo5Hz6clp4nv4XNGjegFjqEYj4tXQcq7MoiGZ4Y6Of3IUT75BBpMDHQ2 9c4XM8BhIj5PQttMbg8R+yKjHIdhtjcOEwE2CY1KyStB1hVnMMQm+cbj/dYKnbwIII/icP Ndf6st0zxG09JCY1vylSAivDExU3LkB5lvP+6OBX0FL3K5jcLTv3bBUAesDw3A== ARC-Seal: i=1; s=key1; d=yhetil.org; t=1649418737; a=rsa-sha256; cv=none; b=YkW0ikj1m+WNNRZMwRnI+wJMIn2qPlmlrEXH0iamwubSsB+QfWfmaGFVyltUOofNH09SWQ cT7tI+wlrMEp1DoceAba4AR57Fe05fTF4muY2HuPlWWppDkzjtVw9BoGNpAsg9emo0Lf0C iW5y62dtGYKWMm8iBgU43NLg5PXQ7Ktv5j48d+EST3OXbgaLF9ulzNiUw7sv8CE2/6QsSw aY0SLCJ5jKLRkEAkm463Z9dNNUJG3fjzw5BaQmbr/Y6YkY4kiEYNSjQTePn1CdiRyYp8RE aQl+4CQowpxI0tti0MzlWcDevPHIdB9k2nwQ/PjBn49pmrSa7S5uq41UKVkxrQ== ARC-Authentication-Results: i=1; aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=gmail.com header.s=20210112 header.b=N9ta99Ei; dmarc=fail reason="SPF not aligned (relaxed)" header.from=gmail.com (policy=none); spf=pass (aspmx1.migadu.com: domain of "bug-guix-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="bug-guix-bounces+larch=yhetil.org@gnu.org" X-Migadu-Spam-Score: 4.63 Authentication-Results: aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=gmail.com header.s=20210112 header.b=N9ta99Ei; dmarc=fail reason="SPF not aligned (relaxed)" header.from=gmail.com (policy=none); spf=pass (aspmx1.migadu.com: domain of "bug-guix-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="bug-guix-bounces+larch=yhetil.org@gnu.org" X-Migadu-Queue-Id: B8E0F3DBBF X-Spam-Score: 4.63 X-Migadu-Scanner: scn0.migadu.com X-TUID: UY7CtCjoh2ei Hi, Consider the package CHETAH, included in Bioconductor release 3.14; but then, --8<---------------cut here---------------start------------->8--- $ guix import cran -a bioconductor CHETAH guix import: warning: failed to retrieve package information from https://cran.r-project.org/web/packages/CHETAH/DESCRIPTION: 404 (Not Found) guix import: error: failed to download description for package 'CHETAH' --8<---------------cut here---------------end--------------->8--- The reason is because there is no source package. Only the Git source repo. Cheers, simon