From: "Mădălin Ionel Patrașcu" <madalinionel.patrascu@mdc-berlin.de>
To: <66843@debbugs.gnu.org>
Cc: Ricardo Wurmus <rekado@elephly.net>
Subject: [bug#66843] [PATCH 02/11] gnu: Add r-r4rna.
Date: Tue, 31 Oct 2023 11:57:20 +0100 [thread overview]
Message-ID: <7d5ca947d109a9ef6a92f861b116242281ed2314.1698749849.git.madalinionel.patrascu@mdc-berlin.de> (raw)
In-Reply-To: <4d5576bdd09911a6a51bbe87a1b905bd07ca0c4b.1698749849.git.madalinionel.patrascu@mdc-berlin.de>
* gnu/packages/bioconductor.scm (r-r4rna): New variable.
Change-Id: I1bde2a17b0ba4a97fa54161744f048dbfaf2217a
---
gnu/packages/bioconductor.scm | 23 +++++++++++++++++++++++
1 file changed, 23 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index dee72de2b7..6a3606b399 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -7779,6 +7779,29 @@ (define-public r-r3cseq
3C-seq assay.")
(license license:gpl3)))
+(define-public r-r4rna
+ (package
+ (name "r-r4rna")
+ (version "1.28.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "R4RNA" version))
+ (sha256
+ (base32 "1i4c9477xsp3hq5kxydrimhl6g8vshwbqgnhap5n1ykxbsval1pp"))))
+ (properties `((upstream-name . "R4RNA")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-biostrings))
+ (home-page "https://www.e-rna.org/r-chie/")
+ (synopsis "RNA visualization and analysis")
+ (description
+ "This package provides a package for RNA basepair analysis, including the
+visualization of basepairs as arc diagrams for easy comparison and annotation of
+sequence and structure. Arc diagrams can additionally be projected onto
+multiple sequence alignments to assess basepair conservation and covariation,
+with numerical methods for computing statistics for each.")
+ (license license:gpl3)))
+
(define-public r-raggedexperiment
(package
(name "r-raggedexperiment")
--
2.41.0
next prev parent reply other threads:[~2023-10-31 11:36 UTC|newest]
Thread overview: 13+ messages / expand[flat|nested] mbox.gz Atom feed top
2023-10-31 10:53 [bug#66843] [PATCH] gnu: Add r-radiogx, r-coregx, r-piano, r-bench, r-profmem, r-relations, r-magicaxis, r-celestial, r-nistunits, r-r4rna and r-r3cseq Mădălin Ionel Patrașcu
2023-10-31 10:57 ` [bug#66843] [PATCH 01/11] gnu: Add r-r3cseq Mădălin Ionel Patrașcu
2023-10-31 10:57 ` Mădălin Ionel Patrașcu [this message]
2023-10-31 10:57 ` [bug#66843] [PATCH 03/11] gnu: Add r-nistunits Mădălin Ionel Patrașcu
2023-10-31 10:57 ` [bug#66843] [PATCH 04/11] gnu: Add r-celestial Mădălin Ionel Patrașcu
2023-10-31 10:57 ` [bug#66843] [PATCH 05/11] gnu: Add r-magicaxis Mădălin Ionel Patrașcu
2023-10-31 10:57 ` [bug#66843] [PATCH 06/11] gnu: Add r-relations Mădălin Ionel Patrașcu
2023-10-31 10:57 ` [bug#66843] [PATCH 07/11] gnu: Add r-profmem Mădălin Ionel Patrașcu
2023-10-31 10:57 ` [bug#66843] [PATCH 08/11] gnu: Add r-bench Mădălin Ionel Patrașcu
2023-10-31 10:57 ` [bug#66843] [PATCH 09/11] gnu: Add r-piano Mădălin Ionel Patrașcu
2023-10-31 10:57 ` [bug#66843] [PATCH 10/11] gnu: Add r-coregx Mădălin Ionel Patrașcu
2023-10-31 10:57 ` [bug#66843] [PATCH 11/11] gnu: Add r-radiogx Mădălin Ionel Patrașcu
2023-10-31 13:00 ` bug#66843: [PATCH] gnu: Add r-radiogx, r-coregx, r-piano, r-bench, r-profmem, r-relations, r-magicaxis, r-celestial, r-nistunits, r-r4rna and r-r3cseq Ricardo Wurmus
Reply instructions:
You may reply publicly to this message via plain-text email
using any one of the following methods:
* Save the following mbox file, import it into your mail client,
and reply-to-all from there: mbox
Avoid top-posting and favor interleaved quoting:
https://en.wikipedia.org/wiki/Posting_style#Interleaved_style
* Reply using the --to, --cc, and --in-reply-to
switches of git-send-email(1):
git send-email \
--in-reply-to=7d5ca947d109a9ef6a92f861b116242281ed2314.1698749849.git.madalinionel.patrascu@mdc-berlin.de \
--to=madalinionel.patrascu@mdc-berlin.de \
--cc=66843@debbugs.gnu.org \
--cc=rekado@elephly.net \
/path/to/YOUR_REPLY
https://kernel.org/pub/software/scm/git/docs/git-send-email.html
* If your mail client supports setting the In-Reply-To header
via mailto: links, try the mailto: link
Be sure your reply has a Subject: header at the top and a blank line
before the message body.
Code repositories for project(s) associated with this external index
https://git.savannah.gnu.org/cgit/guix.git
This is an external index of several public inboxes,
see mirroring instructions on how to clone and mirror
all data and code used by this external index.