From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from mp11.migadu.com ([2001:41d0:306:2d92::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by ms8.migadu.com with LMTPS id cMC9AlpgKWWuZAEA9RJhRA:P1 (envelope-from ) for ; Fri, 13 Oct 2023 17:20:58 +0200 Received: from aspmx1.migadu.com ([2001:41d0:306:2d92::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by mp11.migadu.com with LMTPS id cMC9AlpgKWWuZAEA9RJhRA (envelope-from ) for ; Fri, 13 Oct 2023 17:20:58 +0200 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by aspmx1.migadu.com (Postfix) with ESMTPS id 8A6A840330 for ; Fri, 13 Oct 2023 17:20:57 +0200 (CEST) Authentication-Results: aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=mdc-berlin.de header.s=mdc header.b=TMcx8j4A; spf=pass (aspmx1.migadu.com: domain of "guix-patches-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="guix-patches-bounces+larch=yhetil.org@gnu.org"; dmarc=fail reason="SPF not aligned (relaxed)" header.from=mdc-berlin.de (policy=none) ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=yhetil.org; s=key1; t=1697210458; h=from:from:sender:sender:reply-to:subject:subject:date:date: message-id:message-id:to:to:cc:cc:mime-version:mime-version: content-type:content-type: content-transfer-encoding:content-transfer-encoding:resent-cc: resent-from:resent-sender:resent-message-id:list-id:list-help: list-unsubscribe:list-subscribe:list-post:dkim-signature; bh=gwMZYPs7VVwhCthZEsdmHSDt2S5EAicOTgeK0JcRBaU=; b=uhekHGmqGqrqQpQchrHVLPsDPnVvg3AZ7tLmj+ajOggJ2WodZIIEuqhMuELNN4ko4XFsJb QXLrHLsoGalnQ01INz/v8XEhSL9l5tiTy1cnI2ZjeaoOF5a0Rdlc6rTof3if/6mzTGxz8F LYbPT8ffLysBaE9Wr94Yan/0o4RDmqhKFncNzzR1EAMwdq4Ng8orxamUE1NOgLy6tsFRXw LxiWm8VDBol8Klyc4FwKntDEe337jU5rTUHaKc0MqPgk0Fkhui3jYbjEKkz0QV29SlBHvr Q981UcTUy7f8egFi11aYVVK1MDumC0J2vnwz7PGpkQZRt7l6lIp/uoh0If/klw== ARC-Authentication-Results: i=1; aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=mdc-berlin.de header.s=mdc header.b=TMcx8j4A; spf=pass (aspmx1.migadu.com: domain of "guix-patches-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="guix-patches-bounces+larch=yhetil.org@gnu.org"; dmarc=fail reason="SPF not aligned (relaxed)" header.from=mdc-berlin.de (policy=none) ARC-Seal: i=1; s=key1; d=yhetil.org; t=1697210458; a=rsa-sha256; cv=none; b=u++UsBKe4yLc422/Y6G+cULPUi1GMdRsiCI66t9KOEg7+ydUPdbzXceVcesWKghc8gd3rc 3Bpfsu9V6L0AcCHctwxPudaufda1EMXoi8HP7yXnv9sAv4Gxjlb31PzRkzV6+j+YNu83tK mDTZSN32QOPOEde7SIleyR6Q8fDE4wGx3fWlBuqnmYV+FIyJvEAdpKrn7OIHiNeSW5PacZ 2+s5N6IRS54A+yE1pqy8DvzpXzuxVk+c4+QUOUzySMVezLGYjnsErqrmx2zWOwdxw1xQrt blpLLMGxo5mXJ/pya+ih4AatqGuMo83KIqNkfoE9Nq755PcLZsYkAGbYd0odiw== Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1qrJy1-0000Ne-Vz; Fri, 13 Oct 2023 11:20:46 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1qrJxy-0000Lk-FG for guix-patches@gnu.org; Fri, 13 Oct 2023 11:20:43 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1qrJxv-0000tw-Mf for guix-patches@gnu.org; Fri, 13 Oct 2023 11:20:40 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1qrJyI-00067l-Mr for guix-patches@gnu.org; Fri, 13 Oct 2023 11:21:02 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#66523] [PATCH] gnu: r-tgconfig: Update to (git-version 0.1.2 revision commit). Resent-From: "Afkhami, Navid" Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Fri, 13 Oct 2023 15:21:02 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: report 66523 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 66523@debbugs.gnu.org Cc: "Afkhami, Navid" X-Debbugs-Original-To: Received: via spool by submit@debbugs.gnu.org id=B.169721042023462 (code B ref -1); Fri, 13 Oct 2023 15:21:02 +0000 Received: (at submit) by debbugs.gnu.org; 13 Oct 2023 15:20:20 +0000 Received: from localhost ([127.0.0.1]:47102 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1qrJxb-00066M-DW for submit@debbugs.gnu.org; Fri, 13 Oct 2023 11:20:19 -0400 Received: from lists.gnu.org ([2001:470:142::17]:55152) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1qrJxZ-000661-BD for submit@debbugs.gnu.org; Fri, 13 Oct 2023 11:20:18 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1qrJx5-0007ya-8i for guix-patches@gnu.org; Fri, 13 Oct 2023 11:19:47 -0400 Received: from a2062.mx.srv.dfn.de ([194.95.232.172]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1qrJx2-0000cs-SO for guix-patches@gnu.org; Fri, 13 Oct 2023 11:19:47 -0400 DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=mdc-berlin.de; h= content-type:content-type:content-transfer-encoding:mime-version :x-mailer:message-id:date:date:subject:subject:from:from :received; s=mdc; t=1697210380; x=1699024781; bh=Th4RKiE/ueODkQ8 fytxGMfCeWP6UQGNFRv3Uti85q9Y=; b=TMcx8j4AwzWqfeZZvEJPjfLUQjMK3xw jVG03FfvGrjkIYPOeaH1GFXzsySdTN/C8BlP0UDOJfBAH4QipmiwRYXcL3slJsYD Ocen6FC9BDsMmeR2AH4ZU1CS1vZG7Xp1UEvHcMyOcZQZ6khJrKmMhdCUTyRphSfv j+8zoirqM4rc= Received: from SW-IT-P-EX2.mdc-berlin.net (mgw2.mdc-berlin.de [141.80.113.60]) by a2062.mx.srv.dfn.de (Postfix) with ESMTPS id 32CB2A0196 for ; Fri, 13 Oct 2023 17:19:40 +0200 (CEST) Received: from localhost (141.80.218.27) by SW-IT-P-EX2.mdc-berlin.net (141.80.113.60) with Microsoft SMTP Server (version=TLS1_2, cipher=TLS_ECDHE_RSA_WITH_AES_256_GCM_SHA384) id 15.1.2507.34; Fri, 13 Oct 2023 17:19:39 +0200 From: "Afkhami, Navid" Date: Fri, 13 Oct 2023 15:19:33 +0000 Message-ID: <610f7f05b23a8d89c08d25894294078a6d4fa6da.1697210373.git.Navid.Afkhami@mdc-berlin.de> X-Mailer: git-send-email 2.34.1 MIME-Version: 1.0 Content-Transfer-Encoding: 8bit Content-Type: text/plain X-Originating-IP: [141.80.218.27] X-ClientProxiedBy: SW-IT-P-EX1.mdc-berlin.net (141.80.113.54) To SW-IT-P-EX2.mdc-berlin.net (141.80.113.60) X-TM-AS-Product-Ver: SMEX-14.0.0.3092-9.0.1002-27934.000 X-TM-AS-Result: No-10--9.978800-5.000000 X-TMASE-MatchedRID: LFOyoH/XvLgYkceLgFINhMYv//yaWh0DwTlc9CcHMZerwqxtE531VCiv 9uudOLyHcHe5AESpEauBUGewL2YXt10ieHN50/kHwLYk+NSxc5r7xERmZJ7geKY5ZGw7wyeHORK ZtnpyfK403NybXZGXI3fk+6v7/GOPInM7VIOun4IdZEkR8Y/meQK0ZgbTOeKU7rencS+jsJgjL8 WDWZGeoojQSOd69r3fmyiLZetSf8lBgw5G4NYCZDgGsBPCbyGiwrbXMGDYqV++IjsEEOIzYuU1N a3r7cGm5bJUlUsJmgWhi5EIi/BSx93sorw7zeE6 X-TM-AS-User-Approved-Sender: Yes X-TM-AS-User-Blocked-Sender: No X-TMASE-Result: 10--9.978800-5.000000 X-TMASE-Version: SMEX-14.0.0.3092-9.0.1002-27934.000 X-TM-SNTS-SMTP: AA4DF6BAFDCEBC304512633B9CCF8A325627F4CF2186DEC928B49C62D2F5142F2000:F Received-SPF: pass client-ip=194.95.232.172; envelope-from=Navid.Afkhami@mdc-berlin.de; helo=a2062.mx.srv.dfn.de X-Spam_score_int: -42 X-Spam_score: -4.3 X-Spam_bar: ---- X-Spam_report: (-4.3 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_MED=-2.3, SPF_HELO_PASS=-0.001, SPF_PASS=-0.001, URIBL_SBL_A=0.1 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+larch=yhetil.org@gnu.org Sender: guix-patches-bounces+larch=yhetil.org@gnu.org X-Migadu-Country: US X-Migadu-Flow: FLOW_IN X-Migadu-Spam-Score: 3.94 X-Spam-Score: 3.94 X-Migadu-Queue-Id: 8A6A840330 X-Migadu-Scanner: mx2.migadu.com X-TUID: YFRybUK0Jj1w * gnu/packages/statistics.scm (r-tgconfig): Update to (git-version 0.1.2 revision commit). --- gnu/packages/statistics.scm | 35 ++++++++++++++++++++--------------- 1 file changed, 20 insertions(+), 15 deletions(-) diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index dc7d3c7923..a21b47a9d3 100644 --- a/gnu/packages/statistics.scm +++ b/gnu/packages/statistics.scm @@ -6561,30 +6561,35 @@ (define-public r-tgstat (license license:gpl2)))) (define-public r-tgconfig - (let ((changeset "1e02c7614713bd0866c46f0c679a058f8c6d627e") + (let ((commit "15cf199436ae0b2ac0006b2ca7f0aeeb5c9d4445") (revision "1")) (package (name "r-tgconfig") - (version (string-append "0.0.0.9000-" revision "." (string-take changeset 7))) + (version (git-version "0.1.2" revision commit)) (source (origin - (method hg-fetch) - (uri (hg-reference - (url "https://bitbucket.org/tanaylab/tgconfig") - (changeset changeset))) - (file-name (string-append name "-" version "-checkout")) + (method git-fetch) + (uri (git-reference + (url "https://github.com/tanaylab/tgconfig") + (commit commit))) + (file-name (git-file-name name version)) (sha256 - (base32 - "0xy6c7s7mn1yx191154bwbv1bl424bnvc80syqpl1vdl28ba46rj")))) + (base32 "159m8hhbk9ip2fdy6zsa96v0173q1awcrzdz2rr2796awfaxjgx1")))) + (properties `((upstream-name . "tgconfig"))) (build-system r-build-system) - (propagated-inputs - (list r-yaml)) - (home-page "https://bitbucket.org/tanaylab/tgconfig/") + (propagated-inputs (list r-yaml)) + (home-page "https://github.com/tanaylab/tgconfig") (synopsis "Infrastructure for managing package parameters") (description - "The goal of tgconfig is to provide infrastructure for managing package -parameters.") - (license license:gpl3)))) + "This is a package to provide infrastructure for managing package parameters. +Parameters are easy to get in relevant functions within a package, +and rrror is thrown if a parameter is missing. Developers are able +to register parameters and set their default value in a config file +that is part of the package in YAML format, and users are able to +override parameters using their own YAML. Users get an exception +when trying to override a parameter that was not registered, and +can load multiple parameters to the current environment.") + (license license:gpl3+)))) (define-public r-catterplots (let ((commit "ae17cd5e49ddda4ecfe0eba8a4c21df8c88e72c4") base-commit: 21b44bbc7c7b36eaaf19eb2f92ce654a44b70302 prerequisite-patch-id: 8b3f1b30e7ca1f6ddb21bf801faad91cce276dfd -- 2.34.1