From mboxrd@z Thu Jan 1 00:00:00 1970 From: Ben Woodcroft Subject: Re: PATCH [0/22]: Add roary. Date: Mon, 8 Aug 2016 22:16:43 +1000 Message-ID: <554677d5-b3d8-e412-56e4-ce9c39cd9741@uq.edu.au> References: <20160727125423.7768-1-donttrustben@gmail.com> <877fc26ob4.fsf@gnu.org> Mime-Version: 1.0 Content-Type: text/plain; charset=utf-8; format=flowed Content-Transfer-Encoding: quoted-printable Return-path: Received: from eggs.gnu.org ([2001:4830:134:3::10]:37887) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1bWjUQ-0007nl-KW for guix-devel@gnu.org; Mon, 08 Aug 2016 08:17:07 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1bWjUL-0000ir-Fe for guix-devel@gnu.org; Mon, 08 Aug 2016 08:17:06 -0400 In-Reply-To: <877fc26ob4.fsf@gnu.org> List-Id: "Development of GNU Guix and the GNU System distribution." List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-devel-bounces+gcggd-guix-devel=m.gmane.org@gnu.org Sender: "Guix-devel" To: =?UTF-8?Q?Ludovic_Court=c3=a8s?= Cc: guix-devel@gnu.org, Alex Sassmannshausen Hi, On 31/07/16 21:26, Ludovic Court=C3=A8s wrote: > Hello, > > Ben Woodcroft skribis: > >> This patchset adds roary, a pipeline which at times is used for tracki= ng >> outbreaks of pathogenic bacteria in e.g. foodstuffs or hospitals, by c= omparing >> whole genome sequences. > I looked briefly at this series and I guess you can take into account > Leo=E2=80=99s comments and the push. Thanks, all your comments were helpful Leo. I pushed these after minor=20 modifications now that Alex pushed his log4perl patch. ben