From: Roel Janssen <roel@gnu.org>
To: Efraim Flashner <efraim@flashner.co.il>
Cc: Xinglu Chen <public@yoctocell.xyz>, 47930-done@debbugs.gnu.org
Subject: bug#47930: [PATCH] gnu: Add pbgzip.
Date: Fri, 30 Apr 2021 18:47:59 +0200 [thread overview]
Message-ID: <288c615cc9a12c6333a28f7002429140c2924ae5.camel@gnu.org> (raw)
In-Reply-To: <YIvvxUphQsqgDL2S@3900XT>
On Fri, 2021-04-30 at 14:53 +0300, Efraim Flashner wrote:
>
>
> > From 1af29f66980ba19740e05a27135f141e23b7fd3f Mon Sep 17 00:00:00
> > 2001
> > From: Roel Janssen <roel@gnu.org>
> > Date: Fri, 30 Apr 2021 13:47:43 +0200
> > Subject: [PATCH] gnu: Add pbgzip.
> >
> > ...
> > + (synopsis "Parallel Block GZIP")
> > + (description "This package implements parallel block gzip.
> > For many
> > +formats, in particular genomics data formats, data are compressed
> > in
>
> I wasn't sure about 'data are' vs 'data is' but I think data here is
> plural, so 'data are' should be right.
>
> > +fixed-length blocks such that they can be easily indexed based on
> > a (genomic)
> > +coordinate order, since typically each block is sorted according
> > to this order.
> > +This allows for each block to be individually compressed
> > (deflated), or more
> > +importantly, decompressed (inflated), with the latter enabling
> > random retrieval
> > +of data in large files (gigabytes to terabytes). @code{pbgzip} is
> > not limited
> > +to any particular format, but certain features are tailored to
> > genomics data
> > +formats when enabled. Parallel decompression is somewhat faster,
> > but the true
> > +speedup comes during compression.")
> > + (license license:expat))))
> > +
> > (define-public blasr-libcpp
> > (package
> > (name "blasr-libcpp")
> > --
> > 2.31.1
> >
>
> Looks good to me!
>
Thank you Efraim, and thank you Xinglu Chen.
I pushed this patch.
Kind regards,
Roel Janssen
prev parent reply other threads:[~2021-04-30 17:23 UTC|newest]
Thread overview: 10+ messages / expand[flat|nested] mbox.gz Atom feed top
2021-04-21 12:26 [bug#47930] [PATCH] gnu: Add pbgzip Roel Janssen
2021-04-21 21:44 ` Xinglu Chen
2021-04-21 21:45 ` Xinglu Chen
2021-04-22 16:40 ` Maxime Devos
2021-04-29 7:29 ` Efraim Flashner
2021-04-29 12:22 ` Roel Janssen
2021-04-30 8:30 ` Xinglu Chen
2021-04-30 11:48 ` Roel Janssen
2021-04-30 11:53 ` Efraim Flashner
2021-04-30 16:47 ` Roel Janssen [this message]
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