Re: Help packaging R Quarto Cli

["Sebastien Rey-Coyrehourcq" <sebastien.rey-coyrehourcq@univ-rouen.fr>]

Le Lundi, Octobre 24, 2022 13:43 CEST, Sébastien Rey-Coyrehourcq <sebastien.rey-coyrehourcq@univ-rouen.fr> a écrit:

> Hi,
>
> I’m trying to package Quarto Cli ( <https://github.com/quarto-dev/quarto-cli> ), used in combination with Pandoc to publish -reproducible- scientific document : website, blog, etc.
>
> I first think this is a classic gnu build : ./configure && make && make install BUT, there is a problem because the ./configure script bootstrap “Deno” during the run of configure.sh.
>
> Because this download and compilation of Deno occur during ./configure.sh running, guix cannot patch the  #!/bin/bash path, so ./configure failed. Deno seems also not packaged into guix.
>
> Do you have an idea to resolve this ? Perhaps we could try all together to do this.
>
> I’m starting with this quarto-cli.scm :
>
> ┌────
> │ (use-modules
> │ (guix packages)
> │ (guix download)
> │ (guix build-system gnu)
> │ (guix licenses)
> │ )
> │
> │ (define-public quarto-cli
> │   (package
> │     (name "Quarto-CLI")
> │     (version "1.1.251")
> │     (source (origin
> │               (method url-fetch)
> │               (uri (string-append "https://github.com/quarto-dev/quarto-cli/archive/refs/tags/v"version".tar.gz"))
> │               (sha256
> │                (base32
> │                 "1ycwrjndrrrciymnm3l0lhcd375fddkvjibvc0n084irg6z1lxn6"))))
> │     (build-system gnu-build-system)
> │     (synopsis "Quarto-cli")
> │     (description
> │      "Quarto-cli description")
> │     (home-page "https://github.com/quarto-dev/quarto-cli")

> │     (license gpl3+)))
> │ quarto-cli
> │
> └────
>
> To compile and fail :
> guix build -f quarto-cli.scm
>
> Best,
> Sebastien RC.

Deno contain lot of packages dependencies actually,
here i comment all packages not packaged in rust after a simple run of guix import ...

#+BEGIN_SRC scheme

(use-modules
(guix packages)
(guix build-system cargo)
(guix download)
(guix licenses)
(gnu packages rust)
(gnu packages crates-io)
)

(define-public rust-deno-1
  (package
    (name "rust-deno")
    (version "1.26.2")
    (source (origin
              (method url-fetch)
              (uri (crate-uri "deno" version))
              (file-name (string-append name "-" version ".tar.gz"))
              (sha256
               (base32
                "1yzvdkj8sq475kfbkms1lfysjddkfwcyqhp1ggalfbk4hqhbiz29"))))
    (build-system cargo-build-system)
    (arguments
     `(#:cargo-inputs (("rust-atty" ,rust-atty-0.2)
                       ("rust-base64" ,rust-base64-0.13)
;                       ("rust-cache-control" ,rust-cache-control-0.2)

                        ("rust-chrono" ,rust-chrono-0.4)
;                       ("rust-clap" ,rust-clap-3)
;                       ("rust-clap-complete" ,rust-clap-complete-3)
;                       ("rust-clap-complete-fig" ,rust-clap-complete-fig-3)
                        ("rust-data-url" ,rust-data-url-0.1)
;                       ("rust-deno-ast" ,rust-deno-ast-0.19)
;                       ("rust-deno-broadcast-channel" ,rust-deno-broadcast-channel-0.67)
;                       ("rust-deno-cache" ,rust-deno-cache-0.5)
;                       ("rust-deno-console" ,rust-deno-console-0.73)
;                       ("rust-deno-core" ,rust-deno-core-0.155)
;                       ("rust-deno-core" ,rust-deno-core-0.155)
;                       ("rust-deno-crypto" ,rust-deno-crypto-0.87)
;                       ("rust-deno-doc" ,rust-deno-doc-0.46)
;                       ("rust-deno-emit" ,rust-deno-emit-0.9)
;                       ("rust-deno-fetch" ,rust-deno-fetch-0.96)
;                       ("rust-deno-graph" ,rust-deno-graph-0.34)
;                       ("rust-deno-lint" ,rust-deno-lint-0.33)
;                       ("rust-deno-net" ,rust-deno-net-0.65)
;                       ("rust-deno-node" ,rust-deno-node-0.10)
;                       ("rust-deno-runtime" ,rust-deno-runtime-0.81)
;                       ("rust-deno-task-shell" ,rust-deno-task-shell-0.5)
;                       ("rust-deno-url" ,rust-deno-url-0.73)
;                       ("rust-deno-web" ,rust-deno-web-0.104)
;                       ("rust-deno-webgpu" ,rust-deno-webgpu-0.74)
;                       ("rust-deno-websocket" ,rust-deno-websocket-0.78)
;                       ("rust-deno-webstorage" ,rust-deno-webstorage-0.68)
                       ("rust-dissimilar" ,rust-dissimilar-1)
;                       ("rust-dprint-plugin-json" ,rust-dprint-plugin-json-0.15)
;                       ("rust-dprint-plugin-markdown" ,rust-dprint-plugin-markdown-0.14)
;                       ("rust-dprint-plugin-typescript" ,rust-dprint-plugin-typescript-0.74)
                       ("rust-encoding-rs" ,rust-encoding-rs-0.8)
                       ("rust-env-logger" ,rust-env-logger-0.9)
;                       ("rust-eszip" ,rust-eszip-0.28)
;                       ("rust-fancy-regex" ,rust-fancy-regex-0.10)
                       ("rust-flate2" ,rust-flate2-1)
                       ("rust-fwdansi" ,rust-fwdansi-1)
;                       ("rust-glibc-version" ,rust-glibc-version-0.1)

                       ("rust-http" ,rust-http-0.2)
;                       ("rust-import-map" ,rust-import-map-0.12)
                       ("rust-indexmap" ,rust-indexmap-1)
;                       ("rust-indicatif" ,rust-indicatif-0.17)
;                       ("rust-jsonc-parser" ,rust-jsonc-parser-0.21)
;                       ("rust-junction" ,rust-junction-0.2)
                       ("rust-libc" ,rust-libc-0.2)
                       ("rust-log" ,rust-log-0.4)
;                       ("rust-mitata" ,rust-mitata-0.0.7)
;                       ("rust-monch" ,rust-monch-0.2)
;                       ("rust-napi-sym" ,rust-napi-sym-0.3)
                       ("rust-notify" ,rust-notify-5)
                       ("rust-once-cell" ,rust-once-cell-1)
                       ("rust-os-pipe" ,rust-os-pipe-1)
                       ("rust-percent-encoding" ,rust-percent-encoding-2)
                       ("rust-pin-project" ,rust-pin-project-1)
                       ("rust-rand" ,rust-rand-0.8)
                       ("rust-regex" ,rust-regex-1)
                       ("rust-regex" ,rust-regex-1)
                       ("rust-ring" ,rust-ring-0.16)
;                       ("rust-rustyline" ,rust-rustyline-10)
;                       ("rust-rustyline-derive" ,rust-rustyline-derive-0.7)
                       ("rust-semver" ,rust-semver-1)
                       ("rust-serde" ,rust-serde-1)
                       ("rust-serde" ,rust-serde-1)
                       ("rust-serde-json" ,rust-serde-json-1)
                       ("rust-serde-repr" ,rust-serde-repr-0.1)
                       ("rust-shell-escape" ,rust-shell-escape-0.1)
                       ("rust-tar" ,rust-tar-0.4)
                       ("rust-tempfile" ,rust-tempfile-3)
                       ("rust-text-size" ,rust-text-size-1)
;                       ("rust-text-lines" ,rust-text-lines-0.6)
                       ("rust-tokio" ,rust-tokio-1)
;                       ("rust-tokio-util" ,rust-tokio-util-0.7)
;                       ("rust-tower-lsp" ,rust-tower-lsp-0.17)
                       ("rust-twox-hash" ,rust-twox-hash-1)
                       ("rust-typed-arena" ,rust-typed-arena-2)
;                       ("rust-uuid" ,rust-uuid-1)
                       ("rust-walkdir" ,rust-walkdir-2)
                       ("rust-winapi" ,rust-winapi-0.3)
                       ("rust-winapi" ,rust-winapi-0.3)
                       ("rust-winres" ,rust-winres-0.1)
;                      ("rust-zstd" ,rust-zstd-0.11)
                       )
       #:cargo-development-inputs (
                                   ;("rust-deno-bench-util" ,rust-deno-bench-util-0.67)
                                   ("rust-dotenv" ,rust-dotenv-0.15)
                                   ;("rust-flaky-test" ,rust-flaky-test-0.1)
                                   ;("rust-nix" ,rust-nix-0.24)
                                   ("rust-once-cell" ,rust-once-cell-1)
                                   ("rust-os-pipe" ,rust-os-pipe-1)
                                   ("rust-pretty-assertions" ,rust-pretty-assertions-1)
                                   ;("rust-trust-dns-client" ,rust-trust-dns-client-0.22)
                                   ;("rust-trust-dns-server" ,rust-trust-dns-server-0.22))))
    (home-page "https://github.com/denoland/deno")
    (synopsis "Provides the deno executable")
    (description "This package provides the deno executable")
    (license expat)))

rust-deno-1

#+END_SRC