From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from mp2.migadu.com ([2001:41d0:303:e16b::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by ms8.migadu.com with LMTPS id qHy2Fefm7mWnYgEAe85BDQ:P1 (envelope-from ) for ; Mon, 11 Mar 2024 12:11:35 +0100 Received: from aspmx1.migadu.com ([2001:41d0:303:e16b::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by mp2.migadu.com with LMTPS id qHy2Fefm7mWnYgEAe85BDQ (envelope-from ) for ; Mon, 11 Mar 2024 12:11:35 +0100 X-Envelope-To: larch@yhetil.org Authentication-Results: aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=inria.fr header.s=dc header.b=nhioyPLO; spf=pass (aspmx1.migadu.com: domain of "guix-patches-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="guix-patches-bounces+larch=yhetil.org@gnu.org"; dmarc=fail reason="SPF not aligned (relaxed)" header.from=inria.fr (policy=none) ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=yhetil.org; s=key1; t=1710155495; h=from:from:sender:sender:reply-to:subject:subject:date:date: message-id:message-id:to:to:cc:cc:mime-version:mime-version: content-transfer-encoding:content-transfer-encoding:resent-cc: resent-from:resent-sender:resent-message-id:in-reply-to:in-reply-to: references:references:list-id:list-help:list-unsubscribe: list-subscribe:list-post:dkim-signature; bh=mJoFUd7z47o9fTpU5BovwIVNjInVo7j2oWAjQdmhrEQ=; b=s8LHpSiYGwcysuw3ypKKhUgt5qh8wYlPjh5/H6As4M13UiiCTWhZ1aN8IGcKCJEWSff/g4 Fuy2LHoZUmPrRwf3ckaC21nr4MQQS7KRaedQsGIIINc6bt0R6b1DQhG+nhAjQ+gOKExi0b BSkQ5FL9fvEUncNXd5ie7SQOQk/BLu3beKiIj6iGstsdkw9OqBBe4JsGgG/pyfuuZE2BN7 tiYwkzZ1cv6V2Njaf42S+jDprFksDwmD18Yyfsl5zgLZ2tO+piM0+JwAEuULbIL9QBExw4 4ZADIXHB/EQiu4CyVv5Rgz5HV22edJiUpAcrLDh8sx/pvSa+h1ozS1Sxc+s8rw== ARC-Authentication-Results: i=1; aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=inria.fr header.s=dc header.b=nhioyPLO; spf=pass (aspmx1.migadu.com: domain of "guix-patches-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="guix-patches-bounces+larch=yhetil.org@gnu.org"; dmarc=fail reason="SPF not aligned (relaxed)" header.from=inria.fr (policy=none) ARC-Seal: i=1; s=key1; d=yhetil.org; t=1710155495; a=rsa-sha256; cv=none; b=bK8P96pxwwX4P1MPVkxNsrm6kOC5xVM0mFG4ammGWIO60cDO+VV/oulCh9cYlXfgWGRfcH vZaErb8WqFb9O/BpNKT1cGnW9omUoQeWkwy3fQZh9Sg/YWg7xnJMUC17m2Jru4JxoI7kOt D59ZfPCe50eo0WEgxERwjYoJVjSst11tooaWlXyEl+oCQVmxSkLPTVbKJFLDJDrrQvkIWU WxJTWTlJtGUSjl0X/bjMqfy/oR7M/NlpJ4RLP0APdz0wXnt9vehM8F9hUCLq6LJjJMVhaH RsXRTZqavtquG4QjiPumJ9CeMkgwgqLuGDcX2W3qzTdRjA3aFbH2UH6XUtjQ9A== Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by aspmx1.migadu.com (Postfix) with ESMTPS id 3959346742 for ; Mon, 11 Mar 2024 12:11:35 +0100 (CET) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rjdYo-0006ms-1r; Mon, 11 Mar 2024 07:11:14 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rjdXB-0005tl-Gi for guix-patches@gnu.org; Mon, 11 Mar 2024 07:09:34 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rjdXA-0001U6-Q5 for guix-patches@gnu.org; Mon, 11 Mar 2024 07:09:33 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rjdXh-0002hW-Hs for guix-patches@gnu.org; Mon, 11 Mar 2024 07:10:05 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69729] [PATCH 08/41] gnu: jags: Switch to openblas. Resent-From: Romain GARBAGE Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Mon, 11 Mar 2024 11:10:05 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 69729 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 69729@debbugs.gnu.org Cc: Romain GARBAGE Received: via spool by 69729-submit@debbugs.gnu.org id=B69729.171015535910086 (code B ref 69729); Mon, 11 Mar 2024 11:10:05 +0000 Received: (at 69729) by debbugs.gnu.org; 11 Mar 2024 11:09:19 +0000 Received: from localhost ([127.0.0.1]:39023 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1rjdWx-0002cW-Bt for submit@debbugs.gnu.org; Mon, 11 Mar 2024 07:09:19 -0400 Received: from mail3-relais-sop.national.inria.fr ([192.134.164.104]:58339) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1rjdWh-0002Xe-DN for 69729@debbugs.gnu.org; Mon, 11 Mar 2024 07:09:03 -0400 DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=inria.fr; s=dc; h=from:to:cc:subject:date:message-id:in-reply-to: references:mime-version:content-transfer-encoding; bh=mJoFUd7z47o9fTpU5BovwIVNjInVo7j2oWAjQdmhrEQ=; b=nhioyPLO8EsSZSxtL/bCMSPiv9QVw0t5WBAfc/XP6JK+pQF5Y/phM7a2 ivfHnF4V6OkAKiWPnKmAWUklEFZfT7ZPH+YvllgMzw//WBySeVrQ0gfrn wOFaqyzeVqFcIv0x3krEVzjf/jRvioSWo5wKoMwzDQIJPOXHPj4XrhQ6R w=; Received-SPF: SoftFail (mail3-relais-sop.national.inria.fr: domain of romain.garbage@inria.fr is inclined to not designate 193.50.110.70 as permitted sender) identity=mailfrom; client-ip=193.50.110.70; receiver=mail3-relais-sop.national.inria.fr; envelope-from="romain.garbage@inria.fr"; x-sender="romain.garbage@inria.fr"; x-conformance=spf_only; x-record-type="v=spf1"; x-record-text="v=spf1 include:mailout.safebrands.com a:basic-mail.safebrands.com a:basic-mail01.safebrands.com a:basic-mail02.safebrands.com ip4:128.93.142.0/24 ip4:192.134.164.0/24 ip4:128.93.162.160 ip4:89.107.174.7 mx ~all" Received-SPF: None (mail3-relais-sop.national.inria.fr: no sender authenticity information available from domain of postmaster@guix-A102.bordeaux.inria.fr) identity=helo; client-ip=193.50.110.70; receiver=mail3-relais-sop.national.inria.fr; envelope-from="romain.garbage@inria.fr"; x-sender="postmaster@guix-A102.bordeaux.inria.fr"; x-conformance=spf_only X-IronPort-AV: E=Sophos;i="6.07,116,1708383600"; d="scan'208";a="81786622" Received: from unknown (HELO guix-A102.bordeaux.inria.fr) ([193.50.110.70]) by mail3-relais-sop.national.inria.fr with ESMTP/TLS/ECDHE-RSA-AES256-GCM-SHA384; 11 Mar 2024 12:08:19 +0100 From: Romain GARBAGE Date: Mon, 11 Mar 2024 12:06:49 +0100 Message-ID: <20240311110750.16327-9-romain.garbage@inria.fr> X-Mailer: git-send-email 2.41.0 In-Reply-To: <20240311110750.16327-2-romain.garbage@inria.fr> References: <20240311110750.16327-2-romain.garbage@inria.fr> MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+larch=yhetil.org@gnu.org Sender: guix-patches-bounces+larch=yhetil.org@gnu.org X-Migadu-Flow: FLOW_IN X-Migadu-Country: US X-Migadu-Spam-Score: -3.68 X-Spam-Score: -3.68 X-Migadu-Queue-Id: 3959346742 X-Migadu-Scanner: mx13.migadu.com X-TUID: 4UsNQQEfpOev * gnu/packages/statistics.scm (jags) [inputs]: Switch input dependency from lapack to openblas. [arguments]: Add configure flags. Change-Id: Iea0efef5c70a5284f6859c1424fd4523edcf2bac --- gnu/packages/statistics.scm | 6 +++++- 1 file changed, 5 insertions(+), 1 deletion(-) diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index 0d9f593614..3a70f5f997 100644 --- a/gnu/packages/statistics.scm +++ b/gnu/packages/statistics.scm @@ -180,9 +180,13 @@ (define-public jags (base32 "0aa2w4g5057vn1qjp954s2kwxfmy1h7p5yn56fyi7sz9nmaq69gr")))) (build-system gnu-build-system) + (arguments + (list #:configure-flags + #~(list "--with-lapack=-lopenblas" + "--with-blas=-lopenblas"))) (home-page "https://mcmc-jags.sourceforge.net/") (native-inputs - (list gfortran lapack)) + (list gfortran openblas)) (synopsis "Gibbs sampler") (description "JAGS is Just Another Gibbs Sampler. It is a program for analysis of Bayesian hierarchical models using Markov Chain Monte Carlo (MCMC) -- 2.41.0