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Resent-From: Navid Afkhami Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Fri, 03 Mar 2023 13:08:03 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 61933 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: <61933@debbugs.gnu.org> Cc: Navid Afkhami Received: via spool by 61933-submit@debbugs.gnu.org id=B61933.167784886629297 (code B ref 61933); Fri, 03 Mar 2023 13:08:03 +0000 Received: (at 61933) by debbugs.gnu.org; 3 Mar 2023 13:07:46 +0000 Received: from localhost ([127.0.0.1]:59898 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1pY58T-0007cN-LZ for submit@debbugs.gnu.org; Fri, 03 Mar 2023 08:07:46 -0500 Received: from c2062.mx.srv.dfn.de ([194.95.238.172]:47735) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1pY58R-0007bK-4Y for 61933@debbugs.gnu.org; Fri, 03 Mar 2023 08:07:43 -0500 DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=mdc-berlin.de; h= content-type:content-type:content-transfer-encoding:mime-version :references:in-reply-to:x-mailer:message-id:date:date:subject :subject:from:from:received; s=mdc; t=1677848856; x=1679663257; bh=PO9a8DUz6hIMr3K29B3OWi6/Ukqu+zCCml3ZrUbQeyE=; b=L7/SxRW9g5C4 G4ypI2B4ZeVyLcjGj8u8cnNfCFMD5c+9xjBQMGjS2SRVrhRn83vwfSHbFOnYxTqr bT/h7wdKa26Ybn5A0Q4zTXbdBbuciKWE1LbiS4oECTp5S+CbergW1tG+qz+iEMsg xPd4X/Z7qgk2b2n71iQGihMXRgS4Ukc= Received: from SW-IT-P-EX4.mdc-berlin.net (mgw4.mdc-berlin.de [141.80.113.62]) by c2062.mx.srv.dfn.de (Postfix) with ESMTPS id DE9B8300346 for <61933@debbugs.gnu.org>; Fri, 3 Mar 2023 14:07:36 +0100 (CET) Received: from localhost (141.80.218.27) by SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) with Microsoft SMTP Server (version=TLS1_2, cipher=TLS_ECDHE_RSA_WITH_AES_256_GCM_SHA384) id 15.1.2507.21; Fri, 3 Mar 2023 14:07:36 +0100 From: Navid Afkhami Date: Fri, 3 Mar 2023 13:07:19 +0000 Message-ID: <20230303130723.88484-5-navid.afkhami@mdc-berlin.de> X-Mailer: git-send-email 2.34.1 In-Reply-To: <20230303130723.88484-1-navid.afkhami@mdc-berlin.de> References: <20230303130723.88484-1-navid.afkhami@mdc-berlin.de> MIME-Version: 1.0 Content-Transfer-Encoding: 8bit Content-Type: text/plain X-Originating-IP: [141.80.218.27] X-ClientProxiedBy: SW-IT-P-EX2.mdc-berlin.net (141.80.113.60) To SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) X-TM-AS-Product-Ver: SMEX-14.0.0.3092-9.0.1002-27480.007 X-TM-AS-Result: No-10--3.281700-5.000000 X-TMASE-MatchedRID: I6rpFm0lrcN6fjezFKxXHArcxrzwsv5uwTlc9CcHMZerwqxtE531VCzy bVqWyY2N+JfPIUnmTG/K4w30FlubyQIdG4n3A2CkfOaYwP8dcX5IvK4LrXs1aSdEcnIP1FQIY2i R7K8WcszWhKYfDziAdPJrrM6i6Ao7Bw746+zsRpDdCok3ibXlQeuLFZZYlisfHxPMjOKY7A8Lbi gRnpKlKTpcQTtiHDgWrEZ/07vi8w0iCogUjPmCsKZUkAT5yyFqwsi0wMl8HQzvO/kmc1hOmZ9AK 8brBUyJxtSOLDGeHyzXYedS7FIioKSzNYAWu9nwt0oQIuj+SVeFEVfQxs3N6ZDgmt8QekvB5maC eNv/LIzVGQdqwsDiEg== X-TM-AS-User-Approved-Sender: Yes X-TM-AS-User-Blocked-Sender: No X-TMASE-Result: 10--3.281700-5.000000 X-TMASE-Version: SMEX-14.0.0.3092-9.0.1002-27480.007 X-TM-SNTS-SMTP: FF40AE3D58DD853E73C1ED9F10852D2A7114DC70BF3D99D44114EF5B83CC028D2002:F X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: X-Migadu-Spam-Score: -0.10 X-Spam-Score: -0.10 X-Migadu-Scanner: scn0.migadu.com X-Migadu-Queue-Id: 6572C3E001 List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+larch=yhetil.org@gnu.org Sender: guix-patches-bounces+larch=yhetil.org@gnu.org X-Migadu-Country: US X-Migadu-Flow: FLOW_IN X-TUID: ID2/IRGcY1hH * gnu/packages/bioinformatics.scm (r-markdownreports): New variable. --- gnu/packages/bioinformatics.scm | 37 +++++++++++++++++++++++++++++++++ 1 file changed, 37 insertions(+) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index c6c0da74ff..b311ec6c33 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -8837,6 +8837,43 @@ (define-public r-markdownhelpers "Set of R functions to parse markdown and other generic helpers.") (license license:gpl3)))) +(define-public r-markdownreports + (let ((commit "3ba1103e3ddc6df3a0c090eb884f5e65c461eb31") + (revision "1")) + (package + (name "r-markdownreports") + (version (git-version "4.5.9" revision commit)) + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/vertesy/MarkdownReports") + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "1xmasdb630b6nvxi5m1i8pyxiy49nxpzyxf9h8spdppx92rhdkc8")))) + (properties `((upstream-name . "MarkdownReports"))) + (build-system r-build-system) + (propagated-inputs (list r-clipr + r-codeandroll2 + r-colorramps + r-devtools + r-gplots + r-markdownhelpers + r-rcolorbrewer + r-readwriter + r-sessioninfo + r-sm + r-stringendo + r-venndiagram + r-vioplot)) + (home-page "https://github.com/vertesy/MarkdownReports") + (synopsis "Tool for generating cientific figures and reports") + (description + "This is a set of R functions that allows you to generate precise figures. +This tool will create clean markdown reports about what you just discovered.") + (license license:gpl3)))) + (define-public r-snapatac (package (name "r-snapatac") -- 2.34.1