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[66.158.149.239]) by smtp.gmail.com with ESMTPSA id 2-20020ac82082000000b002f39b99f672sm4287690qtd.12.2022.05.14.21.47.09 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Sat, 14 May 2022 21:47:09 -0700 (PDT) From: Maxim Cournoyer Date: Sun, 15 May 2022 00:36:51 -0400 Message-Id: <20220515044629.6843-24-maxim.cournoyer@gmail.com> X-Mailer: git-send-email 2.36.0 In-Reply-To: <20220515044629.6843-1-maxim.cournoyer@gmail.com> References: <20220515044629.6843-1-maxim.cournoyer@gmail.com> MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+larch=yhetil.org@gnu.org Sender: "Guix-patches" X-Migadu-Flow: FLOW_IN X-Migadu-To: larch@yhetil.org X-Migadu-Country: US ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=yhetil.org; s=key1; t=1652590694; h=from:from:sender:sender:reply-to:subject:subject:date:date: message-id:message-id:to:to:cc:cc:mime-version:mime-version: content-transfer-encoding:content-transfer-encoding:resent-cc: resent-from:resent-sender:resent-message-id:in-reply-to:in-reply-to: references:references:list-id:list-help:list-unsubscribe: list-subscribe:list-post:dkim-signature; bh=cDIoxfsg+BDqEny1NC40cV7te26Dib3iS1HvRWFMRZ8=; b=MdZ2NzsSSPe0V3+k0u8tjORuMT0HcL1UCd3QzEF1gP9iA739D/ELTjGHudf1i6jet1s3/g UajcxHnKj7aRaH3o/5TZbWC7kyA1Y6xA2nNgoiI3WsJethKCJao1HPtjKZ57twZ2MmbV7f w8bG2M/9JKYSY4G4tZs9QpfsPbl2C/HIk3WvW+rGd2iKZtN2NraayHuDC7tOa8vk2s21VD Idhm2DaBHrlaTXrFVc8jud/t08B6PNQ+jAeQ26SjYov7KqrqcNNcAu1egKsMEHsgWd7582 EQBcDKpEspnFV5mI/2d5r3r5f7ASThEyHRjqznS/c3R2t+gVsTJGAv1qMh79Qw== ARC-Seal: i=1; s=key1; d=yhetil.org; t=1652590694; a=rsa-sha256; cv=none; b=Ccn3xnf0QMMcy1xV5Rwxt5NofQ3o2k4jddqVU6adi541gtgyDUJMNsgj9yqKRE99bEY3Qb WIv9ON391qOOlfxLN5eTtwT6ljy5c1iGXPs6ZGoJEbTHkzIx08zdOd8f2oGYdIt3EbM4Np m4g5oip6nsCzo20BPseVIQIHnO2wtcQu8tMQao2xKuy27AfvuDBndlQhPRYFPxVx8hpKIy z4gVYqPP0aP4CcUAoLDip9PBwszmbmMNdYwQzzXFsoY1rPx53w2aUMscf0i3Rac1H51qiZ g3JZGVwhxGcGMSf+31MfoTicWLMdIWqjmsWzlKLsr36KR3iuYqt6m1cnf8rsHA== ARC-Authentication-Results: i=1; aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=gmail.com header.s=20210112 header.b=LBfp96BQ; dmarc=fail reason="SPF not aligned (relaxed)" header.from=gmail.com (policy=none); spf=pass (aspmx1.migadu.com: domain of "guix-patches-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="guix-patches-bounces+larch=yhetil.org@gnu.org" X-Migadu-Spam-Score: 5.67 Authentication-Results: aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=gmail.com header.s=20210112 header.b=LBfp96BQ; dmarc=fail reason="SPF not aligned (relaxed)" header.from=gmail.com (policy=none); spf=pass (aspmx1.migadu.com: domain of "guix-patches-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="guix-patches-bounces+larch=yhetil.org@gnu.org" X-Migadu-Queue-Id: 5491F1B0AC X-Spam-Score: 5.67 X-Migadu-Scanner: scn0.migadu.com X-TUID: v9n9Mv7Ydvln * gnu/packages/bioinformatics.scm (python2-dendropy): Delete variable. --- gnu/packages/bioinformatics.scm | 16 ---------------- 1 file changed, 16 deletions(-) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 5f637fe29a..cb3328cc1c 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -2954,22 +2954,6 @@ (define-public python-dendropy trees (phylogenies) and characters.") (license license:bsd-3))) -(define-public python2-dendropy - (let ((base (package-with-python2 python-dendropy))) - (package/inherit base - (arguments - `(#:phases - (modify-phases %standard-phases - (add-after 'unpack 'remove-failing-test - (lambda _ - ;; This test fails when the full test suite is run, as documented - ;; at https://github.com/jeetsukumaran/DendroPy/issues/74 - (substitute* "tests/test_dataio_nexml_reader_tree_list.py" - (("test_collection_comments_and_annotations") - "do_not_test_collection_comments_and_annotations")) - #t))) - ,@(package-arguments base)))))) - (define-public python-py2bit (package (name "python-py2bit") -- 2.36.0