From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from mp12.migadu.com ([2001:41d0:2:4a6f::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by ms0.migadu.com with LMTPS id yPZcB9MgRGLeFQAAgWs5BA (envelope-from ) for ; Wed, 30 Mar 2022 11:20:19 +0200 Received: from aspmx1.migadu.com ([2001:41d0:2:4a6f::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by mp12.migadu.com with LMTPS id qIkLBNMgRGK/0gAAauVa8A (envelope-from ) for ; Wed, 30 Mar 2022 11:20:19 +0200 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by aspmx1.migadu.com (Postfix) with ESMTPS id B81ADB972 for ; Wed, 30 Mar 2022 11:20:17 +0200 (CEST) Received: from localhost ([::1]:52894 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1nZUUy-0004Iu-MA for larch@yhetil.org; Wed, 30 Mar 2022 05:20:16 -0400 Received: from eggs.gnu.org ([209.51.188.92]:55742) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1nZUUk-0004H6-GE for guix-patches@gnu.org; Wed, 30 Mar 2022 05:20:02 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:40591) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1nZUUk-0007fH-2X for guix-patches@gnu.org; Wed, 30 Mar 2022 05:20:02 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1nZUUj-0000vw-N9 for guix-patches@gnu.org; Wed, 30 Mar 2022 05:20:01 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#54635] [PATCH 0/5] Add wfmash Resent-From: Arun Isaac Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Wed, 30 Mar 2022 09:20:01 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: report 54635 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 54635@debbugs.gnu.org Cc: Arun Isaac , Efraim Flashner X-Debbugs-Original-To: guix-patches@gnu.org Received: via spool by submit@debbugs.gnu.org id=B.16486319793551 (code B ref -1); Wed, 30 Mar 2022 09:20:01 +0000 Received: (at submit) by debbugs.gnu.org; 30 Mar 2022 09:19:39 +0000 Received: from localhost ([127.0.0.1]:34488 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1nZUUN-0000vD-FA for submit@debbugs.gnu.org; Wed, 30 Mar 2022 05:19:39 -0400 Received: from lists.gnu.org ([209.51.188.17]:50358) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1nZUUL-0000v6-Uw for submit@debbugs.gnu.org; Wed, 30 Mar 2022 05:19:38 -0400 Received: from eggs.gnu.org ([209.51.188.92]:55620) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1nZUUJ-0003x4-TF for guix-patches@gnu.org; Wed, 30 Mar 2022 05:19:37 -0400 Received: from mugam.systemreboot.net ([139.59.75.54]:55546) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1nZUUG-00051j-6U for guix-patches@gnu.org; Wed, 30 Mar 2022 05:19:35 -0400 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=systemreboot.net; s=default; h=Content-Transfer-Encoding:MIME-Version: Message-Id:Date:Subject:Cc:To:From:Sender:Reply-To:Content-Type:Content-ID: Content-Description:Resent-Date:Resent-From:Resent-Sender:Resent-To:Resent-Cc :Resent-Message-ID:In-Reply-To:References:List-Id:List-Help:List-Unsubscribe: List-Subscribe:List-Post:List-Owner:List-Archive; bh=OkJqb0iZbQ2STAMSBL7luogokVxaPbErP9/oY0I6N4A=; b=U/WN18qBbuhVV9mybOKkz5DUYK UYJuh4u8ss7f/TZ/Omxd3Iqmq4w8kDKUXHrUYXB4NiJxLb0ZcgxdcAarNSgBXMB3917qaKoITWiKT o9lWvFljFEVVsiYLEScaQZ5L+Y44DUzi/R6grriUy7UchXxrJPOdFR5DM2DCHLnnj2QDlhj+VVJbB AthrubeUP4Bp9ohPIfGMMYq3wiOgXwbDfIe32GrusFXaHMNcUYNNJYhVgc+zdKpPxjdIgqo90fyQo MwHrNtTQ03tAXfAn+2wdY2tYNw4gvRBGgoMkg2Lb//0URvfBby0boEwSsiU92HOpRLwoIMPCo5AbC f+1xxGLQ==; Received: from [192.168.2.1] (port=7014 helo=localhost.localdomain) by systemreboot.net with esmtpsa (TLS1.3) tls TLS_ECDHE_RSA_WITH_AES_256_GCM_SHA384 (Exim 4.95) (envelope-from ) id 1nZUTy-000T5J-UF; Wed, 30 Mar 2022 14:49:14 +0530 From: Arun Isaac Date: Wed, 30 Mar 2022 14:49:13 +0530 Message-Id: <20220330091913.23206-1-arunisaac@systemreboot.net> X-Mailer: git-send-email 2.34.0 MIME-Version: 1.0 Content-Transfer-Encoding: 8bit Received-SPF: pass client-ip=139.59.75.54; envelope-from=arunisaac@systemreboot.net; helo=mugam.systemreboot.net X-Spam_score_int: -20 X-Spam_score: -2.1 X-Spam_bar: -- X-Spam_report: (-2.1 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, SPF_HELO_NONE=0.001, SPF_PASS=-0.001, T_SCC_BODY_TEXT_LINE=-0.01 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+larch=yhetil.org@gnu.org Sender: "Guix-patches" X-Migadu-Flow: FLOW_IN X-Migadu-To: larch@yhetil.org X-Migadu-Country: US ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=yhetil.org; s=key1; t=1648632018; h=from:from:sender:sender:reply-to:subject:subject:date:date: message-id:message-id:to:to:cc:cc:mime-version:mime-version: content-transfer-encoding:content-transfer-encoding:resent-cc: resent-from:resent-sender:resent-message-id:list-id:list-help: list-unsubscribe:list-subscribe:list-post:dkim-signature; bh=OkJqb0iZbQ2STAMSBL7luogokVxaPbErP9/oY0I6N4A=; b=jZGxb3sVQ/Zazrsho/sckl49fdbgCAARFmf05X/7RhqFDScAfmQ0dftb70IAKCCbQF20US leDR8hVUX5eZLY+aU2SF+mFZQgYeezgTEX2RTWHxahFhNU2Lw4BYJnVqNwwDQW7GjvlqGi VzpX9NzhzaK7Cs5ZbqiuObnlYlsHdP5A3TBv3q289N42oGei+Ltk9ddNpjJluo1W8I0uYT ot1nL/O1z/RSYdUxRti9nv2gqMPBgFtUC/efcbmizHZ5djo41iufk8CQqSX6cVW5aZLyj9 5MpvQZ7GWmoAhkFULfdq9lB+o1TQepUOyMk5Y2PbBp8gdZQGIIZWrb8KBMG2hQ== ARC-Seal: i=1; s=key1; d=yhetil.org; t=1648632018; a=rsa-sha256; cv=none; b=QCIeHfpjRxzKPgWlyxKKemA6N2nOJopDNScHdC5yqfgZNwQxV+Al1+lGHy3NxJ2auTXbQh SQ186nNMUr+4KsjiEpD2vlSWj6NbNVTC8Ue67vz0K7JXd8Y9AIvzZjf5jCDc7lA4GDTUGJ p7yurLlCDipaBQzTPsIMlEQywuXqLymg3kjADKX/JXJjW0qVuUXXlbbCCq07wNYTbXyox0 OlRnQNCylubHvjULfcn2c+XarmFd66dKjKMHY4FswTPGa27eszLahy3xiuMpkEQIUdduKF 18ctTrjL+eFmr4Y3A8acNSTeY8N9w8N1bQXJ+hfwNkScJLms6K333vl3oNIKqQ== ARC-Authentication-Results: i=1; aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=systemreboot.net header.s=default header.b="U/WN18qB"; dmarc=fail reason="SPF not aligned (relaxed)" header.from=systemreboot.net (policy=none); spf=pass (aspmx1.migadu.com: domain of "guix-patches-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="guix-patches-bounces+larch=yhetil.org@gnu.org" X-Migadu-Spam-Score: 7.23 Authentication-Results: aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=systemreboot.net header.s=default header.b="U/WN18qB"; dmarc=fail reason="SPF not aligned (relaxed)" header.from=systemreboot.net (policy=none); spf=pass (aspmx1.migadu.com: domain of "guix-patches-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="guix-patches-bounces+larch=yhetil.org@gnu.org" X-Migadu-Queue-Id: B81ADB972 X-Spam-Score: 7.23 X-Migadu-Scanner: scn1.migadu.com X-TUID: oLSnXDLY2Yw/ This patchset adds wfmash, and ensures that, in addition to x86_64, it also cross-compiles to riscv64. Arun Isaac (5): gnu: gsl: Force bootstrap when cross-compiling to riscv64-linux. gnu: htslib: Add bzip2 and xz to inputs. gnu: atomic-queue: Run tests correctly. gnu: atomic-queue: Do not depend on boost when cross-compiling. gnu: Add wfmash. gnu/packages/bioinformatics.scm | 55 +++++++++++++++++++++++++++++++-- gnu/packages/cpp.scm | 26 +++++++++++++--- gnu/packages/maths.scm | 15 ++++++++- 3 files changed, 88 insertions(+), 8 deletions(-) -- 2.34.0