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spf=pass (aspmx1.migadu.com: domain of guix-patches-bounces@gnu.org designates 209.51.188.17 as permitted sender) smtp.mailfrom=guix-patches-bounces@gnu.org X-Migadu-Spam-Score: 2.18 Authentication-Results: aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=mdc-berlin.de header.s=mdc header.b=MAo3MBC7; dmarc=fail reason="SPF not aligned (relaxed)" header.from=mdc-berlin.de (policy=none); spf=pass (aspmx1.migadu.com: domain of guix-patches-bounces@gnu.org designates 209.51.188.17 as permitted sender) smtp.mailfrom=guix-patches-bounces@gnu.org X-Migadu-Queue-Id: 4B3A11A768 X-Spam-Score: 2.18 X-Migadu-Scanner: scn0.migadu.com X-TUID: AHYL0nnB4yeg * gnu/packages/bioconductor.scm (r-xmapbridge): New variable. --- gnu/packages/bioconductor.scm | 27 +++++++++++++++++++++++++++ 1 file changed, 27 insertions(+) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 90a0e1f288..24ab4897d5 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -4627,6 +4627,33 @@ (define-public r-vsn and specific in detecting differential transcription.") (license license:artistic2.0))) +(define-public r-xmapbridge + (package + (name "r-xmapbridge") + (version "1.52.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "xmapbridge" version)) + (sha256 + (base32 "1zsqhisbq6f9qgw9f0a6ixxh635h3qm17117yfns5nnfw73ndlgi")))) + (properties `((upstream-name . "xmapbridge"))) + (build-system r-build-system) + (home-page "https://git.bioconductor.org/packages/xmapbridge") + (synopsis "Display numeric data in the web based genome browser X:MAP") + (description + "The package @code{r-xmapBridge} can plot graphs in the X:Map genome +browser. X:Map uses the Google Maps API to provide a scrollable view of the +genome. It supports a number of species, and can be accessed at +http://xmap.picr.man.ac.uk. This package exports plotting files in a suitable +format. Graph plotting in R is done using calls to the functions +@code{xmap.plot} and @code{xmap.points}, which have parameters that aim to be +similar to those used by the standard plot methods in R. These result in data +being written to a set of files (in a specific directory structure) that +contain the data to be displayed, as well as some additional meta-data +describing each of the graphs.") + (license license:lgpl3))) + (define-public r-xvector (package (name "r-xvector") -- 2.33.0