From mboxrd@z Thu Jan 1 00:00:00 1970 Received: from eggs.gnu.org ([2001:470:142:3::10]:41473) by lists.gnu.org with esmtp (Exim 4.86_2) (envelope-from ) id 1hqLuv-0003dz-LE for guix-patches@gnu.org; Wed, 24 Jul 2019 14:23:10 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1hqLuu-0008Vk-GQ for guix-patches@gnu.org; Wed, 24 Jul 2019 14:23:09 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:57429) by eggs.gnu.org with esmtps (TLS1.0:RSA_AES_128_CBC_SHA1:16) (Exim 4.71) (envelope-from ) id 1hqLuu-0008VU-DB for guix-patches@gnu.org; Wed, 24 Jul 2019 14:23:08 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1hqLuu-0005Pu-8k for guix-patches@gnu.org; Wed, 24 Jul 2019 14:23:08 -0400 Subject: [bug#36797] [PATCH 08/11] gnu: Add r-flowpeaks. Resent-Message-ID: Received: from eggs.gnu.org ([2001:470:142:3::10]:41121) by lists.gnu.org with esmtp (Exim 4.86_2) (envelope-from ) id 1hqLuF-0003J5-Hb for guix-patches@gnu.org; Wed, 24 Jul 2019 14:22:28 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1hqLuE-0007IU-Gy for guix-patches@gnu.org; Wed, 24 Jul 2019 14:22:27 -0400 Received: from mail-wr1-x436.google.com ([2a00:1450:4864:20::436]:44509) by eggs.gnu.org with esmtps (TLS1.0:RSA_AES_128_CBC_SHA1:16) (Exim 4.71) (envelope-from ) id 1hqLuE-0007HO-B6 for guix-patches@gnu.org; Wed, 24 Jul 2019 14:22:26 -0400 Received: by mail-wr1-x436.google.com with SMTP id p17so47980433wrf.11 for ; Wed, 24 Jul 2019 11:22:26 -0700 (PDT) From: zimoun Date: Wed, 24 Jul 2019 20:22:01 +0200 Message-Id: <20190724182204.6818-9-zimon.toutoune@gmail.com> In-Reply-To: <20190724182204.6818-1-zimon.toutoune@gmail.com> References: <20190724182204.6818-1-zimon.toutoune@gmail.com> MIME-Version: 1.0 Content-Transfer-Encoding: 8bit List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+kyle=kyleam.com@gnu.org Sender: "Guix-patches" To: 36797@debbugs.gnu.org * gnu/packages/bioconductor.scm (r-flowpeaks): New variable. --- gnu/packages/bioconductor.scm | 23 +++++++++++++++++++++++ 1 file changed, 23 insertions(+) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 0f023665c2..ab4d9f4075 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -4907,3 +4907,26 @@ and to both short and long sequence reads.") (description "Identifies cell populations in Flow Cytometry data using non-parametric clustering and segmented-regression-based change point detection. Note: R 2.11.0 or newer is required.") (license license:artistic2.0))) + +(define-public r-flowpeaks + (package + (name "r-flowpeaks") + (version "1.30.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "flowPeaks" version)) + (sha256 + (base32 + "1ncz7n6n39svi444yy29ip53398392s3m6z0h2a77rhcnzg456wy")))) + (properties `((upstream-name . "flowPeaks"))) + (build-system r-build-system) + (inputs `(("gsl" ,gsl))) + (home-page + "https://bioconductor.org/packages/flowPeaks") + (synopsis + "An R package for flow data clustering") + (description + "This package provides a fast and automatic clustering to classify the cells into subpopulations based on finding the peaks from the overall density function generated by K-means.") + (license license:artistic2.0))) ;TODO: artistic1.0 does not exist + -- 2.21.0