From mboxrd@z Thu Jan 1 00:00:00 1970 Received: from eggs.gnu.org ([2001:470:142:3::10]:41455) by lists.gnu.org with esmtp (Exim 4.86_2) (envelope-from ) id 1hqLuu-0003c1-Vp for guix-patches@gnu.org; Wed, 24 Jul 2019 14:23:10 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1hqLut-0008UO-MT for guix-patches@gnu.org; Wed, 24 Jul 2019 14:23:08 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:57427) by eggs.gnu.org with esmtps (TLS1.0:RSA_AES_128_CBC_SHA1:16) (Exim 4.71) (envelope-from ) id 1hqLut-0008UD-JA for guix-patches@gnu.org; Wed, 24 Jul 2019 14:23:07 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1hqLut-0005Pf-Bp for guix-patches@gnu.org; Wed, 24 Jul 2019 14:23:07 -0400 Subject: [bug#36796] [PATCH 07/11] gnu: Add r-flowmeans. Resent-Message-ID: Received: from eggs.gnu.org ([2001:470:142:3::10]:41112) by lists.gnu.org with esmtp (Exim 4.86_2) (envelope-from ) id 1hqLuF-0003J1-0q for guix-patches@gnu.org; Wed, 24 Jul 2019 14:22:27 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1hqLuD-0007Hc-Ui for guix-patches@gnu.org; Wed, 24 Jul 2019 14:22:26 -0400 Received: from mail-wr1-x433.google.com ([2a00:1450:4864:20::433]:33645) by eggs.gnu.org with esmtps (TLS1.0:RSA_AES_128_CBC_SHA1:16) (Exim 4.71) (envelope-from ) id 1hqLuD-0007GY-Oh for guix-patches@gnu.org; Wed, 24 Jul 2019 14:22:25 -0400 Received: by mail-wr1-x433.google.com with SMTP id n9so48094525wru.0 for ; Wed, 24 Jul 2019 11:22:25 -0700 (PDT) From: zimoun Date: Wed, 24 Jul 2019 20:22:00 +0200 Message-Id: <20190724182204.6818-8-zimon.toutoune@gmail.com> In-Reply-To: <20190724182204.6818-1-zimon.toutoune@gmail.com> References: <20190724182204.6818-1-zimon.toutoune@gmail.com> MIME-Version: 1.0 Content-Transfer-Encoding: 8bit List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+kyle=kyleam.com@gnu.org Sender: "Guix-patches" To: 36796@debbugs.gnu.org * gnu/packages/bioconductor.scm (r-flowmeans): New variable. --- gnu/packages/bioconductor.scm | 26 ++++++++++++++++++++++++++ 1 file changed, 26 insertions(+) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index d5bd512972..0f023665c2 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -4881,3 +4881,29 @@ and to both short and long sequence reads.") (description "Provides S4 data structures and basic functions to deal with flow cytometry data.") (license license:artistic2.0))) + +(define-public r-flowmeans + (package + (name "r-flowmeans") + (version "1.44.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "flowMeans" version)) + (sha256 + (base32 + "0yp6y3mq5h4nf1d7ybqnriigwfmwanrqavpj3ry482sgiaip1hp2")))) + (properties `((upstream-name . "flowMeans"))) + (build-system r-build-system) + (propagated-inputs + `(("r-biobase" ,r-biobase) + ("r-feature" ,r-feature) + ("r-flowcore" ,r-flowcore) + ("r-rrcov" ,r-rrcov))) + (home-page + "https://bioconductor.org/packages/flowMeans") + (synopsis + "Non-parametric Flow Cytometry Data Gating") + (description + "Identifies cell populations in Flow Cytometry data using non-parametric clustering and segmented-regression-based change point detection. Note: R 2.11.0 or newer is required.") + (license license:artistic2.0))) -- 2.21.0