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From: Leo Famulari <leo@famulari.name>
To: Ricardo Wurmus <rekado@elephly.net>
Cc: guix-devel@gnu.org
Subject: Re: [PATCH 02/16] gnu: Add hisat2.
Date: Tue, 17 Jan 2017 15:36:39 -0500	[thread overview]
Message-ID: <20170117203639.GA17056@jasmine> (raw)
In-Reply-To: <20170117141141.11694-3-rekado@elephly.net>

On Tue, Jan 17, 2017 at 03:11:27PM +0100, Ricardo Wurmus wrote:
> * gnu/packages/bioinformatics.scm (hisat2): New variable.

> +       #:make-flags (list "CC=gcc" "CXX=g++" "allall")

"allall"... We can categorize this alongside -Weverything! ;)

> +         (add-after 'unpack 'make-deterministic
> +           (lambda _
> +             (substitute* "Makefile"
> +               (("`date`") "0"))

I'd take the value of SOURCE_DATE_EPOCH from the environment, but it's
not very important.

  reply	other threads:[~2017-01-17 20:36 UTC|newest]

Thread overview: 28+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2017-01-17 14:11 [PATCH 00/16] Bioinfo stuff Ricardo Wurmus
2017-01-17 14:11 ` [PATCH 01/16] gnu: Add python-argparse Ricardo Wurmus
2017-01-17 14:49   ` Hartmut Goebel
2017-01-17 15:26     ` Ricardo Wurmus
2017-01-17 18:48       ` Alex Kost
2017-01-17 18:47   ` Alex Kost
2017-01-17 14:11 ` [PATCH 02/16] gnu: Add hisat2 Ricardo Wurmus
2017-01-17 20:36   ` Leo Famulari [this message]
2017-01-17 20:49     ` Ricardo Wurmus
2017-01-17 14:11 ` [PATCH 03/16] gnu: Add ribodiff Ricardo Wurmus
2017-01-17 14:11 ` [PATCH 04/16] gnu: Add r-compquadform Ricardo Wurmus
2017-01-17 14:11 ` [PATCH 05/16] gnu: Add r-seqminer Ricardo Wurmus
2017-01-17 14:11 ` [PATCH 06/16] gnu: Add r-raremetals2 Ricardo Wurmus
2017-01-20 13:16   ` Ludovic Courtès
2017-01-20 14:18     ` Ricardo Wurmus
2017-01-20 21:26       ` Ludovic Courtès
2017-01-17 14:11 ` [PATCH 07/16] gnu: Add r-maldiquant Ricardo Wurmus
2017-01-17 14:11 ` [PATCH 08/16] gnu: Add r-protgenerics Ricardo Wurmus
2017-01-17 14:11 ` [PATCH 09/16] gnu: Add r-mzr Ricardo Wurmus
2017-01-17 14:11 ` [PATCH 10/16] gnu: Add r-affyio Ricardo Wurmus
2017-01-17 14:11 ` [PATCH 11/16] gnu: Add r-affy Ricardo Wurmus
2017-01-17 14:11 ` [PATCH 12/16] gnu: Add r-vsn Ricardo Wurmus
2017-01-17 14:11 ` [PATCH 13/16] gnu: Add r-mzid Ricardo Wurmus
2017-01-17 14:11 ` [PATCH 14/16] gnu: Add r-pcamethods Ricardo Wurmus
2017-01-17 14:11 ` [PATCH 15/16] gnu: Add r-msnbase Ricardo Wurmus
2017-01-20 13:17   ` Ludovic Courtès
2017-01-20 13:18   ` Ludovic Courtès
2017-01-17 14:11 ` [PATCH 16/16] gnu: Add r-msnid Ricardo Wurmus

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