From mboxrd@z Thu Jan 1 00:00:00 1970 From: Thomas Danckaert Subject: [PATCH] gnu: Add python-netcdf4. Date: Fri, 23 Dec 2016 16:42:37 +0100 (CET) Message-ID: <20161223.164237.19794021722833533.thomas.danckaert@gmail.com> Mime-Version: 1.0 Content-Type: Text/X-Patch; charset=us-ascii Content-Transfer-Encoding: 7bit Return-path: Received: from eggs.gnu.org ([2001:4830:134:3::10]:39312) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1cKRze-0001et-Da for guix-devel@gnu.org; Fri, 23 Dec 2016 10:42:51 -0500 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1cKRza-0003H6-4l for guix-devel@gnu.org; Fri, 23 Dec 2016 10:42:50 -0500 Received: from mail-wm0-x233.google.com ([2a00:1450:400c:c09::233]:37987) by eggs.gnu.org with esmtps (TLS1.0:RSA_AES_128_CBC_SHA1:16) (Exim 4.71) (envelope-from ) id 1cKRzZ-0003Go-U3 for guix-devel@gnu.org; Fri, 23 Dec 2016 10:42:46 -0500 Received: by mail-wm0-x233.google.com with SMTP id k184so19614438wme.1 for ; Fri, 23 Dec 2016 07:42:45 -0800 (PST) Received: from localhost (182.126-67-87.adsl-dyn.isp.belgacom.be. [87.67.126.182]) by smtp.gmail.com with ESMTPSA id c133sm37821384wme.12.2016.12.23.07.42.43 for (version=TLS1_2 cipher=ECDHE-RSA-AES128-GCM-SHA256 bits=128/128); Fri, 23 Dec 2016 07:42:43 -0800 (PST) Content-Disposition: inline; filename="0001-gnu-Add-python-netcdf4.patch" List-Id: "Development of GNU Guix and the GNU System distribution." List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-devel-bounces+gcggd-guix-devel=m.gmane.org@gnu.org Sender: "Guix-devel" To: guix-devel@gnu.org >From b4b54b695e286c19332600c38d5e07fabee409f8 Mon Sep 17 00:00:00 2001 From: Thomas Danckaert Date: Fri, 23 Dec 2016 15:06:43 +0100 Subject: [PATCH] gnu: Add python-netcdf4. * gnu/packages/python.scm (python-netcdf4): New variable. --- gnu/packages/python.scm | 50 +++++++++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 50 insertions(+) diff --git a/gnu/packages/python.scm b/gnu/packages/python.scm index cc53f76..37ad3df 100644 --- a/gnu/packages/python.scm +++ b/gnu/packages/python.scm @@ -800,6 +800,56 @@ concepts.") (define-public python2-h5py (package-with-python2 python-h5py)) +(define-public python-netcdf4 + (package + (name "python-netcdf4") + (version "1.2.6") + (source + (origin + (method url-fetch) + (uri (pypi-uri "netCDF4" version)) + (sha256 + (base32 + "1qcymsfxsdfr4sx0vl7ih5d14z66k6c9sjy4gb6rjaksk5387zvg")))) + (build-system python-build-system) + (native-inputs + `(("python-cython" ,python-cython))) + (propagated-inputs + `(("python-numpy" ,python-numpy))) + (inputs + `(("netcdf" ,netcdf) + ("hdf4" ,hdf4) + ("hdf5" ,hdf5))) + (arguments + '(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (setenv "NO_NET" "1") ;; disable opendap tests + (with-directory-excursion "test" + (setenv "PYTHONPATH" ;; find and add the library we just built + (string-append + (car (find-files "../build" "lib.*" + #:directories? #:t + #:fail-on-error? #:t)) + ":" (getenv "PYTHONPATH"))) + (zero? (system* "python" "run_all.py")))))))) + (home-page + "https://github.com/Unidata/netcdf4-python") + (synopsis "Python/numpy interface to the netCDF library") + (description "Netcdf4-python is a Python interface to the netCDF C +library. netCDF version 4 has many features not found in earlier +versions of the library and is implemented on top of HDF5. This module +can read and write files in both the new netCDF 4 and the old netCDF 3 +format, and can create files that are readable by HDF5 clients. The +API is modelled after Scientific.IO.NetCDF, and should be familiar to +users of that module.") + (license + (license:non-copyleft "https://unidata.github.io/netcdf4-python")))) + +(define-public python2-netcdf4 + (package-with-python2 python-netcdf4)) + (define-public python-lockfile (package (name "python-lockfile") -- 2.7.4