[PATCH] gnu: Add python-netcdf4.

[Thomas Danckaert <thomas.danckaert@gmail.com>]

[-- Attachment #1: 0001-gnu-Add-python-netcdf4.patch --]
[-- Type: Text/X-Patch, Size: 2667 bytes --]

From b4b54b695e286c19332600c38d5e07fabee409f8 Mon Sep 17 00:00:00 2001
From: Thomas Danckaert <thomas.danckaert@gmail.com>
Date: Fri, 23 Dec 2016 15:06:43 +0100
Subject: [PATCH] gnu: Add python-netcdf4.

* gnu/packages/python.scm (python-netcdf4): New variable.
---
 gnu/packages/python.scm | 50 +++++++++++++++++++++++++++++++++++++++++++++++++
 1 file changed, 50 insertions(+)

diff --git a/gnu/packages/python.scm b/gnu/packages/python.scm
index cc53f76..37ad3df 100644
--- a/gnu/packages/python.scm
+++ b/gnu/packages/python.scm
@@ -800,6 +800,56 @@ concepts.")
 (define-public python2-h5py
   (package-with-python2 python-h5py))
 
+(define-public python-netcdf4
+  (package
+    (name "python-netcdf4")
+    (version "1.2.6")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (pypi-uri "netCDF4" version))
+       (sha256
+        (base32
+         "1qcymsfxsdfr4sx0vl7ih5d14z66k6c9sjy4gb6rjaksk5387zvg"))))
+    (build-system python-build-system)
+    (native-inputs
+     `(("python-cython" ,python-cython)))
+    (propagated-inputs
+     `(("python-numpy" ,python-numpy)))
+    (inputs
+     `(("netcdf" ,netcdf)
+       ("hdf4" ,hdf4)
+       ("hdf5" ,hdf5)))
+    (arguments
+     '(#:phases
+       (modify-phases %standard-phases
+         (replace 'check
+           (lambda _
+             (setenv "NO_NET" "1") ;; disable opendap tests
+             (with-directory-excursion "test"
+               (setenv "PYTHONPATH" ;; find and add the library we just built
+                       (string-append
+                        (car (find-files "../build" "lib.*"
+                                         #:directories? #:t
+                                         #:fail-on-error? #:t))
+                        ":" (getenv "PYTHONPATH")))
+               (zero? (system* "python" "run_all.py"))))))))
+    (home-page
+     "https://github.com/Unidata/netcdf4-python")
+    (synopsis "Python/numpy interface to the netCDF library")
+    (description "Netcdf4-python is a Python interface to the netCDF C
+library.  netCDF version 4 has many features not found in earlier
+versions of the library and is implemented on top of HDF5.  This module
+can read and write files in both the new netCDF 4 and the old netCDF 3
+format, and can create files that are readable by HDF5 clients.  The
+API is modelled after Scientific.IO.NetCDF, and should be familiar to
+users of that module.")
+    (license
+     (license:non-copyleft "https://unidata.github.io/netcdf4-python"))))
+
+(define-public python2-netcdf4
+  (package-with-python2 python-netcdf4))
+
 (define-public python-lockfile
   (package
     (name "python-lockfile")
-- 
2.7.4