From mboxrd@z Thu Jan 1 00:00:00 1970 From: Ricardo Wurmus Subject: [PATCH 18/25] gnu: Add r-rbgl. Date: Wed, 21 Sep 2016 22:45:34 +0200 Message-ID: <20160921204541.3981-18-ricardo.wurmus@mdc-berlin.de> References: <20160921204541.3981-1-ricardo.wurmus@mdc-berlin.de> Mime-Version: 1.0 Content-Type: text/plain Return-path: Received: from eggs.gnu.org ([2001:4830:134:3::10]:48273) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1bmoR3-0008EO-CX for guix-devel@gnu.org; Wed, 21 Sep 2016 16:48:08 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1bmoQz-0002lS-Cc for guix-devel@gnu.org; Wed, 21 Sep 2016 16:48:05 -0400 Received: from sinope02.bbbm.mdc-berlin.de ([141.80.25.24]:56066) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1bmoQz-0002lE-67 for guix-devel@gnu.org; Wed, 21 Sep 2016 16:48:01 -0400 Received: from localhost (localhost [127.0.0.1]) by sinope02.bbbm.mdc-berlin.de (Postfix) with ESMTP id A131041B87D for ; Wed, 21 Sep 2016 22:48:00 +0200 (CEST) Received: from sinope02.bbbm.mdc-berlin.de ([127.0.0.1]) by localhost (sinope02.bbbm.mdc-berlin.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id 1IsQUOzMp9nf for ; Wed, 21 Sep 2016 22:47:55 +0200 (CEST) Received: from HTCAONE.mdc-berlin.net (puck.citx.mdc-berlin.de [141.80.36.101]) (using TLSv1 with cipher ECDHE-RSA-AES256-SHA (256/256 bits)) (No client certificate requested) by sinope02.bbbm.mdc-berlin.de (Postfix) with ESMTPS for ; Wed, 21 Sep 2016 22:47:55 +0200 (CEST) In-Reply-To: <20160921204541.3981-1-ricardo.wurmus@mdc-berlin.de> List-Id: "Development of GNU Guix and the GNU System distribution." List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-devel-bounces+gcggd-guix-devel=m.gmane.org@gnu.org Sender: "Guix-devel" To: guix-devel@gnu.org * gnu/packages/bioinformatics.scm (r-rbgl): New variable. --- gnu/packages/bioinformatics.scm | 21 +++++++++++++++++++++ 1 file changed, 21 insertions(+) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index a5aadd0..d9acb00 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -5192,6 +5192,27 @@ distribution.") databases. Packages produced are intended to be used with AnnotationDbi.") (license license:artistic2.0))) +(define-public r-rbgl + (package + (name "r-rbgl") + (version "1.48.1") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "RBGL" version)) + (sha256 + (base32 + "1k82zcbyfx3p9hc8r0hwq73krbhakjan8fgbfr6w8z2crfkv3zmz")))) + (properties `((upstream-name . "RBGL"))) + (build-system r-build-system) + (propagated-inputs `(("r-graph" ,r-graph))) + (home-page "http://www.bioconductor.org/packages/RBGL") + (synopsis "Interface to the Boost graph library") + (description + "This package provides a fairly extensive and comprehensive interface to +the graph algorithms contained in the Boost library.") + (license license:artistic2.0))) + (define-public vsearch (package (name "vsearch") -- 2.9.3