From mboxrd@z Thu Jan 1 00:00:00 1970 From: Efraim Flashner Subject: Re: [PATCH] gnu: Add r-edger. Date: Mon, 23 May 2016 11:08:51 +0300 Message-ID: <20160523080851.GA23593@debian-netbook> References: <87lh3r61ab.fsf@gnu.org> <20160523015421.GA22738@jasmine> Mime-Version: 1.0 Content-Type: multipart/signed; micalg=pgp-sha512; protocol="application/pgp-signature"; boundary="fdj2RfSjLxBAspz7" Return-path: Received: from eggs.gnu.org ([2001:4830:134:3::10]:52702) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1b4kvF-0003n0-Oj for guix-devel@gnu.org; Mon, 23 May 2016 04:09:10 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1b4kvB-00071E-EH for guix-devel@gnu.org; Mon, 23 May 2016 04:09:08 -0400 Received: from flashner.co.il ([178.62.234.194]:42903) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1b4kvB-0006zq-7L for guix-devel@gnu.org; Mon, 23 May 2016 04:09:05 -0400 Content-Disposition: inline In-Reply-To: List-Id: "Development of GNU Guix and the GNU System distribution." List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-devel-bounces+gcggd-guix-devel=m.gmane.org@gnu.org Sender: "Guix-devel" To: Ricardo Wurmus Cc: guix-devel --fdj2RfSjLxBAspz7 Content-Type: text/plain; charset=utf-8 Content-Disposition: inline Content-Transfer-Encoding: quoted-printable On Mon, May 23, 2016 at 09:33:28AM +0200, Ricardo Wurmus wrote: >=20 > Leo Famulari writes: >=20 > > On Tue, May 03, 2016 at 09:36:28AM +0200, Roel Janssen wrote: > >> * gnu/packages/bioinformatics.scm (r-edger): New variable. > > > > I tried to build this (and limma), but the source tarball is no longer > > available. I couldn't find any archived releases on the bioconductor > > site. >=20 > Yes, this is a very annoying problem with Bioconductor. I=E2=80=99m not = sure > but I think this has been raised on the Bioconductor mailing lists some > months ago. There is no archive at the moment. >=20 > All previous releases might still be available via SVN, though, so maybe > we can find a way to generalise this and add an SVN origin as a > fallback. Maybe we should not use the tarballs at all and convert all > of the Bioconductor packages to use SVN instead? >=20 It would be easier than making our own archive of releases or systematically uploading them all to archive.org. --=20 Efraim Flashner =D7=90=D7=A4=D7=A8=D7=99=D7=9D = =D7=A4=D7=9C=D7=A9=D7=A0=D7=A8 GPG key =3D A28B F40C 3E55 1372 662D 14F7 41AA E7DC CA3D 8351 Confidentiality cannot be guaranteed on emails sent or received unencrypted --fdj2RfSjLxBAspz7 Content-Type: application/pgp-signature; name="signature.asc" -----BEGIN PGP SIGNATURE----- Version: GnuPG v2 iQIcBAEBCgAGBQJXQrqPAAoJEPTB05F+rO6TIvEP/ieZxw7D3EEKXhfTKPmP55od SzXgGu9HJNwXVVTBSo3FAfaRlefCXGcy10LNrOuqzNrdAXDdbJBMn29h6s29Zo8Z vZQp3PbwhS7vjS3hrTjXpyIQewfttr9bA99z1c5xJbD5TVi03IqsgiAkmiPQyPOO O4yfkmE2OdP14JXfOcPT3mDPBF/sZ5inN9zv75N2qUBGwrf5pWqNG/SM09SjVp2b FCyO/5Sthl1+xE46uzpVBLmjhvJ7/USHMy0o2RfTD3xCNezeGX3jDQ0xrztnOg/o ISc136UInpl5IKFvOsSx0xPTRFKrCP7KAejzCeuQNdJ57YdxkjnzTruXNKvqN/bm Earsji8V0+VZ+Ccu8dmO1IQ1LoxZgB1nt0ZF6dijG5hwB+vxPJ81Y4b+iZhu0ix6 Wrd8+VwgNlCkgc97IPzQ5tR1U+Wdfy6WpJGwuTkVHb0ritBRGROK0RBrsvmz208w fN+w461FAz/t1x2quyBtEy8ONqP0uXGhCvqL1dEOWPd00bftIWNv3nDg1bD68tZ+ bgJOJsJXywseq5PD9W4put1/EsZp76Y8Us00trGimx63N8yXizE15gXMdpC90aEz kiDOQk1xMnBz64/OmK9Fv/e/9lZx+D6ypLwNTYWtgkwfYeOVTjzTov0bYJrw3Uvv 2iWXOzdRoB/N76Ro+bba =nIWJ -----END PGP SIGNATURE----- --fdj2RfSjLxBAspz7--