Python updates

Python updates

[Andreas Enge]

Hello,

I just ran "guix refresh", and it seems there are lots of python packages
to be updated, sometimes with version jumps to 2.0.0 or 3.0.0. Avis aux
amateurs! (Translation: If there are python lovers with a bit of time out
there, it would be nice if they could have a look, update the packages and
check whether the dependent packages still build.)

Andreas


PS: The output of "guix refresh":
gnu/packages/wget.scm:35:13: wget would be upgraded from 1.16.3 to 1.17
gnu/packages/web.scm:2894:13: r-jsonlite would be upgraded from 0.9.17 to 0.9.19
gnu/packages/web.scm:2985:13: r-curl would be upgraded from 0.9.3 to 0.9.4
gnu/packages/tls.scm:43:13: libtasn1 would be upgraded from 4.5 to 4.7
gnu/packages/statistics.scm:948:13: python-patsy would be upgraded from 0.4.0 to 0.4.1
gnu/packages/statistics.scm:725:13: r-microbenchmark would be upgraded from 1.4-2 to 1.4-2.1
gnu/packages/statistics.scm:370:13: r-stringi would be upgraded from 0.5-5 to 1.0-1
gnu/packages/statistics.scm:1147:13: r-roxygen2 would be upgraded from 5.0.0 to 5.0.1
gnu/packages/statistics.scm:986:4: python2-patsy would be upgraded from 0.4.0 to 0.4.1
gnu/packages/statistics.scm:827:13: r-testthat would be upgraded from 0.10.0 to 0.11.0
gnu/packages/rdf.scm:364:4: python2-rdflib would be upgraded from 4.1.2 to 4.2.1
gnu/packages/rdf.scm:333:13: python-rdflib would be upgraded from 4.1.2 to 4.2.1
gnu/packages/python.scm:5557:13: python2-ipaddress would be upgraded from 1.0.14 to 1.0.15
gnu/packages/python.scm:5421:13: python2-monotonic would be upgraded from 0.3 to 0.4
gnu/packages/python.scm:762:13: python-setuptools would be upgraded from 18.3.1 to 18.7
gnu/packages/python.scm:2624:13: python-blinker would be upgraded from 1.3 to 1.4
gnu/packages/python.scm:2164:13: python-jsonschema would be upgraded from 2.4.0 to 2.5.1
gnu/packages/python.scm:2524:13: python2-sphinx would be upgraded from 1.2.3 to 1.3.2
gnu/packages/python.scm:4599:13: python2-networkx would be upgraded from 1.9.1 to 1.10
gnu/packages/python.scm:3738:13: python-xcffib would be upgraded from 0.1.9 to 0.4.0
gnu/packages/python.scm:1944:13: python2-coverage would be upgraded from 3.7.1 to 4.0.3
gnu/packages/python.scm:2082:13: python-certifi would be upgraded from 14.05.14 to 2015.11.20.1
gnu/packages/python.scm:4303:13: python2-urwid would be upgraded from 1.3.0 to 1.3.1
gnu/packages/python.scm:1597:13: python2-pytest would be upgraded from 2.6.1 to 2.8.3
gnu/packages/python.scm:3645:13: python-pycparser would be upgraded from 2.10 to 2.14
gnu/packages/python.scm:1999:13: behave would be upgraded from 1.2.4 to 1.2.5
gnu/packages/python.scm:5421:13: python-monotonic would be upgraded from 0.3 to 0.4
gnu/packages/python.scm:4374:13: python2-apsw would be upgraded from 3.8.7.3-r1 to 3.8.11.1-r1
gnu/packages/python.scm:341:13: python2-psutil would be upgraded from 3.0.1 to 3.3.0
gnu/packages/python.scm:4221:4: python2-ipython would be upgraded from 3.2.1 to 4.0.1
gnu/packages/python.scm:914:13: python2-dateutil would be upgraded from 2.2 to 2.4.2
gnu/packages/python.scm:3837:13: python2-decorator would be upgraded from 3.4.2 to 4.0.4
gnu/packages/python.scm:3980:13: python2-pathpy would be upgraded from 8.1.1 to 8.1.2
gnu/packages/python.scm:1944:13: python-coverage would be upgraded from 3.7.1 to 4.0.3
gnu/packages/python.scm:4303:13: python-urwid would be upgraded from 1.3.0 to 1.3.1
gnu/packages/python.scm:1168:13: python2-simplejson would be upgraded from 3.3.0 to 3.8.1
gnu/packages/python.scm:1597:13: python-pytest would be upgraded from 2.6.1 to 2.8.3
gnu/packages/python.scm:2524:13: python-sphinx would be upgraded from 1.2.3 to 1.3.2
gnu/packages/python.scm:4374:13: python-apsw would be upgraded from 3.8.7.3-r1 to 3.8.11.1-r1
gnu/packages/python.scm:988:13: python2-pandas would be upgraded from 0.16.0 to 0.17.1
gnu/packages/python.scm:2963:13: python2-fastlmm would be upgraded from 0.2.14 to 0.2.21
gnu/packages/python.scm:2441:13: python2-joblib would be upgraded from 0.9.0b4 to 0.9.3
gnu/packages/python.scm:1502:13: python2-nose would be upgraded from 1.3.4 to 1.3.7
gnu/packages/python.scm:341:13: python-psutil would be upgraded from 3.0.1 to 3.3.0
gnu/packages/python.scm:1064:13: python2-pysam would be upgraded from 0.8.1 to 0.8.4
gnu/packages/python.scm:914:13: python-dateutil would be upgraded from 2.2 to 2.4.2
gnu/packages/python.scm:3980:13: python-pathpy would be upgraded from 8.1.1 to 8.1.2
gnu/packages/python.scm:2624:13: python2-blinker would be upgraded from 1.3 to 1.4
gnu/packages/python.scm:3837:13: python-decorator would be upgraded from 3.4.2 to 4.0.4
gnu/packages/python.scm:2391:13: python2-jinja2 would be upgraded from 2.7.3 to 2.8
gnu/packages/python.scm:1168:13: python-simplejson would be upgraded from 3.3.0 to 3.8.1
gnu/packages/python.scm:5039:13: python2-flake8 would be upgraded from 2.4.1 to 2.5.0
gnu/packages/python.scm:988:13: python-pandas would be upgraded from 0.16.0 to 0.17.1
gnu/packages/python.scm:2441:13: python-joblib would be upgraded from 0.9.0b4 to 0.9.3
gnu/packages/python.scm:1064:13: python-pysam would be upgraded from 0.8.1 to 0.8.4
gnu/packages/python.scm:712:13: python2-lockfile would be upgraded from 0.9.1 to 0.12.2
gnu/packages/python.scm:5039:13: python-flake8 would be upgraded from 2.4.1 to 2.5.0
gnu/packages/python.scm:2136:13: python2-requests would be upgraded from 2.8.0 to 2.8.1
gnu/packages/python.scm:3308:13: python2-pysnptools would be upgraded from 0.2.13 to 0.3.5
gnu/packages/python.scm:2823:13: python2-rq would be upgraded from 0.5.2 to 0.5.6
gnu/packages/python.scm:2056:13: python2-pyld would be upgraded from 0.6.0 to 0.6.8
gnu/packages/python.scm:712:13: python-lockfile would be upgraded from 0.9.1 to 0.12.2
gnu/packages/python.scm:5846:13: python2-libarchive-c would be upgraded from 2.1 to 2.2
gnu/packages/python.scm:5394:11: python2-iso8601 would be upgraded from 0.1.10 to 0.1.11
gnu/packages/python.scm:2136:13: python-requests would be upgraded from 2.8.0 to 2.8.1
gnu/packages/python.scm:3580:13: python-pillow would be upgraded from 2.8.1 to 3.0.0
gnu/packages/python.scm:5197:13: python2-fonttools would be upgraded from 2.5 to 3.0
gnu/packages/python.scm:484:13: python-httplib2 would be upgraded from 0.9.1 to 0.9.2
gnu/packages/python.scm:2823:13: python-rq would be upgraded from 0.5.2 to 0.5.6
gnu/packages/python.scm:2056:13: python-pyld would be upgraded from 0.6.0 to 0.6.8
gnu/packages/python.scm:4270:13: python2-html5lib would be upgraded from 1.0b3 to 1.0b8
gnu/packages/python.scm:5846:13: python-libarchive-c would be upgraded from 2.1 to 2.2
gnu/packages/python.scm:5394:11: python-iso8601 would be upgraded from 0.1.10 to 0.1.11
gnu/packages/python.scm:2499:13: python2-pygments would be upgraded from 1.6 to 2.0.2
gnu/packages/python.scm:372:13: python-passlib would be upgraded from 1.6.2 to 1.6.5
gnu/packages/python.scm:1571:13: python2-py would be upgraded from 1.4.23 to 1.4.31
gnu/packages/python.scm:886:13: python2-six would be upgraded from 1.9.0 to 1.10.0
gnu/packages/python.scm:4933:13: python2-pyflakes would be upgraded from 0.9.2 to 1.0.0
gnu/packages/python.scm:4677:4: python2-seaborn would be upgraded from 0.5.1 to 0.6.0
gnu/packages/python.scm:4599:13: python-networkx would be upgraded from 1.9.1 to 1.10
gnu/packages/python.scm:4270:13: python-html5lib would be upgraded from 1.0b3 to 1.0b8
gnu/packages/python.scm:4503:13: python2-cssutils would be upgraded from 1.0 to 1.0.1
gnu/packages/python.scm:2499:13: python-pygments would be upgraded from 1.6 to 2.0.2
gnu/packages/python.scm:965:13: python-parsedatetime would be upgraded from 1.2 to 1.5
gnu/packages/python.scm:5534:13: python2-pyasn1 would be upgraded from 0.1.8 to 0.1.9
gnu/packages/python.scm:1571:13: python-py would be upgraded from 1.4.23 to 1.4.31
gnu/packages/python.scm:3580:13: python2-pillow would be upgraded from 2.8.1 to 3.0.0
gnu/packages/python.scm:4872:13: python-pyzmq would be upgraded from 14.6.0 to 15.1.0
gnu/packages/python.scm:4933:13: python-pyflakes would be upgraded from 0.9.2 to 1.0.0
gnu/packages/python.scm:4650:13: python-seaborn would be upgraded from 0.5.1 to 0.6.0
gnu/packages/python.scm:4128:13: python-ipython would be upgraded from 3.2.1 to 4.0.1
gnu/packages/python.scm:3176:4: python2-numexpr would be upgraded from 2.4.4 to 2.4.6
gnu/packages/python.scm:3693:13: python2-cffi would be upgraded from 1.2.1 to 1.3.1
gnu/packages/python.scm:2338:13: python2-virtualenv would be upgraded from 1.11.6 to 13.1.2
gnu/packages/python.scm:546:13: python2-ccm would be upgraded from 2.0.4.1 to 2.0.5
gnu/packages/python.scm:1730:13: python2-testscenarios would be upgraded from 0.4 to 0.5.0
gnu/packages/python.scm:736:13: python2-mock would be upgraded from 1.0.1 to 1.3.0
gnu/packages/python.scm:3484:13: python2-sqlalchemy would be upgraded from 0.9.7 to 1.0.9
gnu/packages/python.scm:5534:13: python-pyasn1 would be upgraded from 0.1.8 to 0.1.9
gnu/packages/python.scm:3370:4: python2-rpy2 would be upgraded from 2.6.0 to 2.7.4
gnu/packages/python.scm:2189:13: python2-unidecode would be upgraded from 0.04.16 to 0.04.18
gnu/packages/python.scm:2109:13: python2-click would be upgraded from 4.0 to 6.2
gnu/packages/python.scm:3150:13: python-numexpr would be upgraded from 2.4.4 to 2.4.6
gnu/packages/python.scm:1502:13: python-nose would be upgraded from 1.3.4 to 1.3.7
gnu/packages/python.scm:3693:13: python-cffi would be upgraded from 1.2.1 to 1.3.1
gnu/packages/python.scm:5702:4: python2-cryptography would be upgraded from 1.0.2 to 1.1.1
gnu/packages/python.scm:5448:13: python2-webob would be upgraded from 1.5.0b0 to 1.5.1
gnu/packages/python.scm:2338:13: python-virtualenv would be upgraded from 1.11.6 to 13.1.2
gnu/packages/python.scm:546:13: python-ccm would be upgraded from 2.0.4.1 to 2.0.5
gnu/packages/python.scm:1730:13: python-testscenarios would be upgraded from 0.4 to 0.5.0
gnu/packages/python.scm:3484:13: python-sqlalchemy would be upgraded from 0.9.7 to 1.0.9
gnu/packages/python.scm:4827:4: python2-tornado would be upgraded from 4.1 to 4.3
gnu/packages/python.scm:702:4: python2-h5py would be upgraded from 2.4.0 to 2.5.0
gnu/packages/python.scm:2653:13: pelican would be upgraded from 3.6.0 to 3.6.3
gnu/packages/python.scm:2189:13: python-unidecode would be upgraded from 0.04.16 to 0.04.18
gnu/packages/python.scm:4412:13: python2-lxml would be upgraded from 3.4.2 to 3.5.0
gnu/packages/python.scm:451:13: python-paramiko would be upgraded from 1.15.2 to 1.16.0
gnu/packages/python.scm:2109:13: python-click would be upgraded from 4.0 to 6.2
gnu/packages/python.scm:2796:13: python2-redis would be upgraded from 2.10.3 to 2.10.5
gnu/packages/python.scm:2029:13: python2-exif-read would be upgraded from 1.4.2 to 2.1.2
gnu/packages/python.scm:762:13: python2-setuptools would be upgraded from 18.3.1 to 18.7
gnu/packages/python.scm:5448:13: python-webob would be upgraded from 1.5.0b0 to 1.5.1
gnu/packages/python.scm:2553:13: python2-sphinx-rtd-theme would be upgraded from 0.1.6 to 0.1.9
gnu/packages/python.scm:372:13: python2-passlib would be upgraded from 1.6.2 to 1.6.5
gnu/packages/python.scm:5094:13: python2-mistune would be upgraded from 0.7 to 0.7.1
gnu/packages/python.scm:4801:13: python-tornado would be upgraded from 4.1 to 4.3
gnu/packages/python.scm:4092:13: python2-traitlets would be upgraded from 4.0.0 to 4.1.0b1
gnu/packages/python.scm:4412:13: python-lxml would be upgraded from 3.4.2 to 3.5.0
gnu/packages/python.scm:879:4: python2-keyring would be upgraded from 3.8 to 5.6
gnu/packages/python.scm:4872:13: python2-pyzmq would be upgraded from 14.6.0 to 15.1.0
gnu/packages/python.scm:2796:13: python-redis would be upgraded from 2.10.3 to 2.10.5
gnu/packages/python.scm:1392:13: python-parse would be upgraded from 1.6.4 to 1.6.6
gnu/packages/python.scm:600:13: python2-babel would be upgraded from 1.3 to 2.1.1
gnu/packages/python.scm:1879:13: python2-fixtures would be upgraded from 1.3.1 to 1.4.0
gnu/packages/python.scm:2029:13: python-exif-read would be upgraded from 1.4.2 to 2.1.2
gnu/packages/python.scm:4241:13: python2-isodate would be upgraded from 0.5.1 to 0.5.4
gnu/packages/python.scm:3341:13: python-rpy2 would be upgraded from 2.6.0 to 2.7.4
gnu/packages/python.scm:658:13: python-h5py would be upgraded from 2.4.0 to 2.5.0
gnu/packages/python.scm:2553:13: python-sphinx-rtd-theme would be upgraded from 0.1.6 to 0.1.9
gnu/packages/python.scm:1026:13: python-tzlocal would be upgraded from 1.1.1 to 1.2
gnu/packages/python.scm:4628:13: snakemake would be upgraded from 3.2.1 to 3.5.3
gnu/packages/python.scm:3927:13: python2-pexpect would be upgraded from 3.3 to 4.0.1
gnu/packages/python.scm:5094:13: python-mistune would be upgraded from 0.7 to 0.7.1
gnu/packages/python.scm:1201:13: python2-pyicu would be upgraded from 1.8 to 1.9.2
gnu/packages/python.scm:4092:13: python-traitlets would be upgraded from 4.0.0 to 4.1.0b1
gnu/packages/python.scm:1552:13: python2-unittest2 would be upgraded from 0.5.1 to 1.1.0
gnu/packages/python.scm:886:13: python-six would be upgraded from 1.9.0 to 1.10.0
gnu/packages/python.scm:5197:13: python-fonttools would be upgraded from 2.5 to 3.0
gnu/packages/python.scm:484:13: python2-httplib2 would be upgraded from 0.9.1 to 0.9.2
gnu/packages/python.scm:600:13: python-babel would be upgraded from 1.3 to 2.1.1
gnu/packages/python.scm:1879:13: python-fixtures would be upgraded from 1.3.1 to 1.4.0
gnu/packages/python.scm:4241:13: python-isodate would be upgraded from 0.5.1 to 0.5.4
gnu/packages/python.scm:1102:13: python2-pysqlite would be upgraded from 2.6.3a to 2.8.1
gnu/packages/python.scm:1785:13: python2-subunit would be upgraded from 0.0.21 to 1.2.0
gnu/packages/python.scm:840:13: python-keyring would be upgraded from 3.8 to 5.6
gnu/packages/python.scm:3927:13: python-pexpect would be upgraded from 3.3 to 4.0.1
gnu/packages/python.scm:5506:13: python2-prettytable would be upgraded from 0.7.2 to 7
gnu/packages/python.scm:1699:13: python2-testtools would be upgraded from 1.0.0 to 1.8.1
gnu/packages/python.scm:5639:13: python2-cryptography-vectors would be upgraded from 1.0.2 to 1.1.1
gnu/packages/python.scm:2391:13: python-jinja2 would be upgraded from 2.7.3 to 2.8
gnu/packages/python.scm:5665:13: python-cryptography would be upgraded from 1.0.2 to 1.1.1
gnu/packages/python.scm:1785:13: python-subunit would be upgraded from 0.0.21 to 1.2.0
gnu/packages/python.scm:736:13: python-mock would be upgraded from 1.0.1 to 1.3.0
gnu/packages/python.scm:5506:13: python-prettytable would be upgraded from 0.7.2 to 7
gnu/packages/python.scm:2164:13: python2-jsonschema would be upgraded from 2.4.0 to 2.5.1
gnu/packages/python.scm:1699:13: python-testtools would be upgraded from 1.0.0 to 1.8.1
gnu/packages/python.scm:2082:13: python2-certifi would be upgraded from 14.05.14 to 2015.11.20.1
gnu/packages/python.scm:3738:13: python2-xcffib would be upgraded from 0.1.9 to 0.4.0
gnu/packages/python.scm:451:13: python2-paramiko would be upgraded from 1.15.2 to 1.16.0
gnu/packages/python.scm:1339:13: python-enum34 would be upgraded from 1.0 to 1.1.1
gnu/packages/python.scm:5639:13: python-cryptography-vectors would be upgraded from 1.0.2 to 1.1.1
gnu/packages/python.scm:3645:13: python2-pycparser would be upgraded from 2.10 to 2.14
gnu/packages/parallel.scm:31:13: parallel would be upgraded from 20151022 to 20151122
gnu/packages/openstack.scm:319:13: python-stevedore would be upgraded from 1.7.0 to 1.9.0
gnu/packages/openstack.scm:591:13: python-oslosphinx would be upgraded from 3.1.0 to 4.0.0
gnu/packages/openstack.scm:246:13: python-pbr would be upgraded from 1.6.0 to 1.8.1
gnu/packages/openstack.scm:406:13: python2-oslo.config would be upgraded from 2.4.0 to 3.0.0
gnu/packages/openstack.scm:288:13: python-requests-mock would be upgraded from 0.6.0 to 0.7.0
gnu/packages/openstack.scm:140:13: python2-mox3 would be upgraded from 0.8.0 to 0.12.0
gnu/packages/openstack.scm:170:13: python-os-client-config would be upgraded from 1.4.0 to 1.12.0
gnu/packages/openstack.scm:511:11: python-oslo.log would be upgraded from 1.6.0 to 2.0.0
gnu/packages/openstack.scm:140:13: python-mox3 would be upgraded from 0.8.0 to 0.12.0
gnu/packages/openstack.scm:621:13: python-oslotest would be upgraded from 1.10.0 to 2.0.0
gnu/packages/openstack.scm:443:13: python2-oslo.context would be upgraded from 0.6.0 to 1.0.0
gnu/packages/openstack.scm:31:13: python2-bandit would be upgraded from 0.13.2 to 0.16.2
gnu/packages/openstack.scm:360:13: python2-tempest-lib would be upgraded from 0.9.0 to 0.11.0
gnu/packages/openstack.scm:591:13: python2-oslosphinx would be upgraded from 3.1.0 to 4.0.0
gnu/packages/openstack.scm:319:13: python2-stevedore would be upgraded from 1.7.0 to 1.9.0
gnu/packages/openstack.scm:406:13: python-oslo.config would be upgraded from 2.4.0 to 3.0.0
gnu/packages/openstack.scm:71:13: python2-debtcollector would be upgraded from 0.5.0 to 1.0.0
gnu/packages/openstack.scm:288:13: python2-requests-mock would be upgraded from 0.6.0 to 0.7.0
gnu/packages/openstack.scm:659:13: python-oslo.utils would be upgraded from 2.5.0 to 3.0.0
gnu/packages/openstack.scm:170:13: python2-os-client-config would be upgraded from 1.4.0 to 1.12.0
gnu/packages/openstack.scm:552:13: python2-oslo.serialization would be upgraded from 1.9.0 to 2.0.0
gnu/packages/openstack.scm:474:13: python2-oslo.i18n would be upgraded from 2.5.0 to 3.0.0
gnu/packages/openstack.scm:552:13: python-oslo.serialization would be upgraded from 1.9.0 to 2.0.0
gnu/packages/openstack.scm:474:13: python-oslo.i18n would be upgraded from 2.5.0 to 3.0.0
gnu/packages/openstack.scm:621:13: python2-oslotest would be upgraded from 1.10.0 to 2.0.0
gnu/packages/openstack.scm:511:11: python2-oslo.log would be upgraded from 1.6.0 to 2.0.0
gnu/packages/openstack.scm:246:13: python2-pbr would be upgraded from 1.6.0 to 1.8.1
gnu/packages/openstack.scm:31:13: python-bandit would be upgraded from 0.13.2 to 0.16.2
gnu/packages/openstack.scm:71:13: python-debtcollector would be upgraded from 0.5.0 to 1.0.0
gnu/packages/openstack.scm:360:13: python-tempest-lib would be upgraded from 0.9.0 to 0.11.0
gnu/packages/openstack.scm:659:13: python2-oslo.utils would be upgraded from 2.5.0 to 3.0.0
gnu/packages/openstack.scm:443:13: python-oslo.context would be upgraded from 0.6.0 to 1.0.0
gnu/packages/multiprecision.scm:33:12: gmp would be upgraded from 6.0.0a to 6.1.0
gnu/packages/man.scm:165:13: help2man would be upgraded from 1.47.2 to 1.47.3
gnu/packages/gnupg.scm:45:13: libgpg-error would be upgraded from 1.19 to 1.20
gnu/packages/gnupg.scm:113:13: libassuan would be upgraded from 2.4.0 to 2.4.1
gnu/packages/gnupg.scm:67:13: libgcrypt would be upgraded from 1.6.3 to 1.6.4
gnu/packages/gnupg.scm:331:13: python2-gnupg would be upgraded from 0.3.7 to 0.3.8
gnu/packages/gnupg.scm:331:13: python-gnupg would be upgraded from 0.3.7 to 0.3.8
gnu/packages/glib.scm:141:12: glib would be upgraded from 2.46.1 to 2.47.3
gnu/packages/emacs.scm:1078:13: emacs-debbugs would be upgraded from 0.7 to 0.8
gnu/packages/emacs.scm:856:13: emacs-auctex would be upgraded from 11.88.6 to 11.89
gnu/packages/bioinformatics.scm:1663:13: macs would be upgraded from 2.1.0.20140616 to 2.1.0.20150731
gnu/packages/bioinformatics.scm:257:13: python2-pybedtools would be upgraded from 0.6.9 to 0.7.4
gnu/packages/bioinformatics.scm:724:13: python2-bx-python would be upgraded from 0.7.2 to 0.7.3
gnu/packages/base.scm:76:12: grep would be upgraded from 2.21 to 2.22
Backtrace:
In ice-9/boot-9.scm:
 157: 16 [catch #t #<catch-closure f41b00> ...]
In unknown file:
   ?: 15 [apply-smob/1 #<catch-closure f41b00>]
In ice-9/boot-9.scm:
  63: 14 [call-with-prompt prompt0 ...]
In ice-9/eval.scm:
 432: 13 [eval # #]
In ice-9/boot-9.scm:
2401: 12 [save-module-excursion #<procedure f5e940 at ice-9/boot-9.scm:4045:3 ()>]
4050: 11 [#<procedure f5e940 at ice-9/boot-9.scm:4045:3 ()>]
1724: 10 [%start-stack load-stack #<procedure f69060 at ice-9/boot-9.scm:4041:10 ()>]
1729: 9 [#<procedure f74ea0 ()>]
In unknown file:
   ?: 8 [primitive-load "/home/privat/Programme/guix/scripts/guix"]
In guix/ui.scm:
1173: 7 [run-guix-command refresh]
In ice-9/boot-9.scm:
 157: 6 [catch srfi-34 #<procedure 3aa42a0 at guix/ui.scm:411:2 ()> ...]
 157: 5 [catch system-error ...]
In srfi/srfi-1.scm:
 616: 4 [for-each #<procedure 3aa4140 at guix/scripts/refresh.scm:390:18 (package)> ...]
In guix/scripts/refresh.scm:
 391: 3 [#<procedure 3aa4140 at guix/scripts/refresh.scm:390:18 (package)> #]
In guix/upstream.scm:
 136: 2 [package-update-path # #]
In guix/import/pypi.scm:
 237: 1 [latest-release "ansible"]
In unknown file:
   ?: 0 [scm-error misc-error #f ...]

ERROR: In procedure scm-error:
ERROR: No source release found for pypi package:  "ansible" "2.0.0"

Re: Python updates

[Efraim Flashner]

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On Mon, 30 Nov 2015 20:19:04 +0100
Andreas Enge <andreas@enge.fr> wrote:

> Hello,
> 
> I just ran "guix refresh", and it seems there are lots of python packages
> to be updated, sometimes with version jumps to 2.0.0 or 3.0.0. Avis aux
> amateurs! (Translation: If there are python lovers with a bit of time out
> there, it would be nice if they could have a look, update the packages and
> check whether the dependent packages still build.)
> 
> Andreas
> 
> 
> PS: The output of "guix refresh":
> [...]

I was actually thinking of looking at this when I finish my current python
project. In case anyone else wants to take a look at it sooner, one of the
circular dependencies in the updates is python-mock-1.3.0 depends on
python-pbr-0.11, which depends on python-pip, which depends on python-mock
(for tests).  Also, updating python-urwid doesn't automatically fix the build
failures.

-- 
Efraim Flashner   <efraim@flashner.co.il>   אפרים פלשנר
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Re: Python updates

[Ricardo Wurmus]

> gnu/packages/python.scm:4221:4: python2-ipython would be upgraded from 3.2.1 to 4.0.1

I’m working on this but there are still many problems with IPython.
I’ll try to polish and submit the patches tomorrow.

~~ Ricardo

Re: Python updates

[Ludovic Courtès]

Andreas Enge <andreas@enge.fr> skribis:

> Backtrace:
> In ice-9/boot-9.scm:
>  157: 16 [catch #t #<catch-closure f41b00> ...]
> In unknown file:
>    ?: 15 [apply-smob/1 #<catch-closure f41b00>]
> In ice-9/boot-9.scm:
>   63: 14 [call-with-prompt prompt0 ...]
> In ice-9/eval.scm:
>  432: 13 [eval # #]
> In ice-9/boot-9.scm:
> 2401: 12 [save-module-excursion #<procedure f5e940 at ice-9/boot-9.scm:4045:3 ()>]
> 4050: 11 [#<procedure f5e940 at ice-9/boot-9.scm:4045:3 ()>]
> 1724: 10 [%start-stack load-stack #<procedure f69060 at ice-9/boot-9.scm:4041:10 ()>]
> 1729: 9 [#<procedure f74ea0 ()>]
> In unknown file:
>    ?: 8 [primitive-load "/home/privat/Programme/guix/scripts/guix"]
> In guix/ui.scm:
> 1173: 7 [run-guix-command refresh]
> In ice-9/boot-9.scm:
>  157: 6 [catch srfi-34 #<procedure 3aa42a0 at guix/ui.scm:411:2 ()> ...]
>  157: 5 [catch system-error ...]
> In srfi/srfi-1.scm:
>  616: 4 [for-each #<procedure 3aa4140 at guix/scripts/refresh.scm:390:18 (package)> ...]
> In guix/scripts/refresh.scm:
>  391: 3 [#<procedure 3aa4140 at guix/scripts/refresh.scm:390:18 (package)> #]
> In guix/upstream.scm:
>  136: 2 [package-update-path # #]
> In guix/import/pypi.scm:
>  237: 1 [latest-release "ansible"]
> In unknown file:
>    ?: 0 [scm-error misc-error #f ...]
>
> ERROR: In procedure scm-error:
> ERROR: No source release found for pypi package:  "ansible" "2.0.0"

We have a bug here; updaters should never fail.  Fixed in 85dce71.

Ludo’.

Re: Python updates

[Federico Beffa]

Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de> writes:

>> gnu/packages/python.scm:4221:4: python2-ipython would be upgraded from 3.2.1 to 4.0.1
>
> I’m working on this but there are still many problems with IPython.
> I’ll try to polish and submit the patches tomorrow.

Upgrading 'ipython' to version 4.0 will break 'emacs-ob-ipython'. If you
upgrade the former, could you please also take care of the latter.

We should be careful to check that we don't break dependencies by upgrades...

Thanks,
Fede