From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from mp1 ([2001:41d0:8:6d80::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by ms0.migadu.com with LMTPS id DHTPASye62CwLAAAgWs5BA (envelope-from ) for ; Mon, 12 Jul 2021 03:43:08 +0200 Received: from aspmx1.migadu.com ([2001:41d0:8:6d80::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by mp1 with LMTPS id eOGQOCue62BzBAAAbx9fmQ (envelope-from ) for ; Mon, 12 Jul 2021 01:43:07 +0000 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by aspmx1.migadu.com (Postfix) with ESMTPS id 4822338623 for ; Mon, 12 Jul 2021 03:43:07 +0200 (CEST) Received: from localhost ([::1]:55236 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1m2kyQ-0005Vr-Cu for larch@yhetil.org; Sun, 11 Jul 2021 21:43:06 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:32808) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1m2kyM-0005Vj-Gw for guix-patches@gnu.org; Sun, 11 Jul 2021 21:43:02 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:52783) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1m2kyM-0002Ma-6w for guix-patches@gnu.org; Sun, 11 Jul 2021 21:43:02 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1m2kyL-0006P8-Vf for guix-patches@gnu.org; Sun, 11 Jul 2021 21:43:01 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#49408] [PATCH 2/2] gnu: biber: Update to 2.16 Resent-From: Thiago Jung Bauermann Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Mon, 12 Jul 2021 01:43:01 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 49408 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: Nathan Benedetto =?UTF-8?Q?Proen=C3=A7a?= Cc: 49408@debbugs.gnu.org Received: via spool by 49408-submit@debbugs.gnu.org id=B49408.162605414824577 (code B ref 49408); Mon, 12 Jul 2021 01:43:01 +0000 Received: (at 49408) by debbugs.gnu.org; 12 Jul 2021 01:42:28 +0000 Received: from localhost ([127.0.0.1]:36096 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1m2kxo-0006OJ-2f for submit@debbugs.gnu.org; Sun, 11 Jul 2021 21:42:28 -0400 Received: from mx.kolabnow.com ([95.128.36.40]:45228) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1m2kxk-0006O4-4k for 49408@debbugs.gnu.org; Sun, 11 Jul 2021 21:42:27 -0400 Received: from localhost (unknown [127.0.0.1]) by ext-mx-out003.mykolab.com (Postfix) with ESMTP id 785104186C; Mon, 12 Jul 2021 03:42:18 +0200 (CEST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=kolabnow.com; h= content-type:content-type:content-transfer-encoding:mime-version :references:in-reply-to:message-id:date:date:subject:subject :from:from:received:received:received; s=dkim20160331; t= 1626054137; x=1627868538; bh=FKKaPaGIG03CClDyQYjZcKbtNyLqUBq0rUW YW3bTP5w=; b=MPdw/QJvJrgsjPc11To9ZBpmX2Y52DMptLkVN/qZTnrZp01usK1 oQyV//jN/JYR78Obxh6kShgM2qrnsjnaOX/Xwup0Cy4oPWWCmdG5kJzz50xFo4eG eiF+AfAdq6CXaMilOXu0h2Bd1ki0bO78dpUACFF47//GKCHdZ/WXfd6v60G5jAvK WGy3y6KJNCwgwTTh8WdNIXE/wFb8W3NSg9jEMG7wT2++Oh5/0Fc+Exa7DjYvEipg db9Ll9ZeaZVBVRskTl5VHv1aky8DLc+etI70tEo8I8hEkUVWTYLnxPo0ZNbJYAZe 3uVHvj+CwF5qTHlUnwIM/nnMXfCx54UDYIkgqsydLSp5QAaBIJXS9fMXHRvNhLhq t6xmesOj+hLOEOFuq/Ev/RA+dVEejTIYdY7g313/zk2bgB/mIglLRtOJpANy+k1e a6cbvaYOkLxsAq49kNv2UA3qPDct2gkWq8a78jjC2x+OpKjZokkMpDX8OLcWCHjU PPljgqaDK34ic3/R0pTZ7beW+qsp3/ZYNnS6Nz4bDXLX550lhRfjxjwEJig/uYkC qvq04QiYjXO9vR08N+kaPpSWyEJO7UxNjCKdpBOi+cXf48q7ZIxJKA6TmPnnGStX 5WvSbnU+YtFe3J4gVGzK8vSB+JOHNAweG4OBTFv8CbCGKVCj20p6mDDc= X-Virus-Scanned: amavisd-new at mykolab.com Received: from mx.kolabnow.com ([127.0.0.1]) by localhost (ext-mx-out003.mykolab.com [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id Wvf2XI2twQYT; Mon, 12 Jul 2021 03:42:17 +0200 (CEST) Received: from int-mx003.mykolab.com (unknown [10.9.13.3]) by ext-mx-out003.mykolab.com (Postfix) with ESMTPS id C7D7240345; Mon, 12 Jul 2021 03:42:15 +0200 (CEST) Received: from ext-subm002.mykolab.com (unknown [10.9.6.2]) by int-mx003.mykolab.com (Postfix) with ESMTPS id 424ED34C6; Mon, 12 Jul 2021 03:42:15 +0200 (CEST) Date: Sun, 11 Jul 2021 22:42:10 -0300 Message-ID: <2007465.nTdyYzDDKo@popigai> In-Reply-To: <87k0lza9eb.fsf@archlinux.i-did-not-set--mail-host-address--so-tickle-me> References: <20210704234449.424436-1-bauermann@kolabnow.com> <87k0lza9eb.fsf@archlinux.i-did-not-set--mail-host-address--so-tickle-me> MIME-Version: 1.0 Content-Transfer-Encoding: quoted-printable Content-Type: text/plain; charset="UTF-8" X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+larch=yhetil.org@gnu.org Sender: "Guix-patches" Reply-to: Thiago Jung Bauermann X-ACL-Warn: , Thiago Jung Bauermann via Guix-patches From: Thiago Jung Bauermann via Guix-patches via X-Migadu-Flow: FLOW_IN ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=yhetil.org; s=key1; t=1626054187; h=from:from:sender:sender:reply-to:reply-to:subject:subject:date:date: message-id:message-id:to:to:cc:cc:mime-version:mime-version: content-type:content-type: content-transfer-encoding:content-transfer-encoding:resent-cc: resent-from:resent-sender:resent-message-id:in-reply-to:in-reply-to: references:references:list-id:list-help:list-unsubscribe: list-subscribe:list-post:dkim-signature; bh=FKKaPaGIG03CClDyQYjZcKbtNyLqUBq0rUWYW3bTP5w=; b=URMcO27pP1TTkHTjC/Rd87FWzp6pdw3U1RmlPF0UqZ0D/Bdl8liW9RAKcKjiKZq8zxZuT6 Pt5Jv2v3ox6T4kGStnNEzA0WWknvW5Hx6ecL2zH1J2bM/1vROxJC48boCWlv64f23mZand yQAI6Ln5hKMdRTTTUWEfUvFK/RAd9bM8iHzCngztpb6rJWHQrvJDaxE1YsiOv89u8gksA7 D5uIFNrDL6xo4u1itZiF6Rl1MwCAdQ+Z83CQcaf74Yk/MFgGnQr4fZdbShErAh39MUPctF kHfR6nwOoTEaVKuLTDVRwsXqqZEXsaPjkBQ7cQWLM4FZ2IqrltvuJhcgmwtTdg== ARC-Seal: i=1; s=key1; d=yhetil.org; t=1626054187; a=rsa-sha256; cv=none; b=DsDYil+7qaPOjguXk12bzbExD/SCFFQnKJqqNajKbVvlGANfXEloRARG640Y2VPA2bcsE0 3QPtc5fZSbaxKyYEfQe0uBtQgdaUEhPX/jTKq+ber8xSjzpY5wJw38KnQZqb20pdY2c5DO FZVjQEiezET6WBJOZMiD82kYAz3DdpzKL9GR3SQnXTthzNBCCaHRiG+E3YfBdLC7TPYicm PUiCV7qLGvUYjhmJPxEf2DbMuB640M/F9XkH2QIzKaPuv4hEZOYo/9zaUKdpHmkl+9y5QL HcKGHG8LN6WAONLIvuRwT+SabtZ4rG/nbnCgB2KkSdQV8V1J/UAlExfPPBWsHQ== ARC-Authentication-Results: i=1; aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=kolabnow.com header.s=dkim20160331 header.b="MPdw/QJv"; spf=pass (aspmx1.migadu.com: domain of guix-patches-bounces@gnu.org designates 209.51.188.17 as permitted sender) smtp.mailfrom=guix-patches-bounces@gnu.org X-Migadu-Spam-Score: -2.40 Authentication-Results: aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=kolabnow.com header.s=dkim20160331 header.b="MPdw/QJv"; dmarc=pass (policy=none) header.from=gnu.org; spf=pass (aspmx1.migadu.com: domain of guix-patches-bounces@gnu.org designates 209.51.188.17 as permitted sender) smtp.mailfrom=guix-patches-bounces@gnu.org X-Migadu-Queue-Id: 4822338623 X-Spam-Score: -2.40 X-Migadu-Scanner: scn0.migadu.com X-TUID: 0rs7iTSTQs/W Hi Nathan, Em sexta-feira, 9 de julho de 2021, =C3=A0s 10:45:16 -03, Nathan Benedetto Proen=C3=A7a escreveu: > Add perl-unicode-collate as biber input >=20 > Upstream appears to have fixed this: recent issue was closed after It took me a while to understand that =E2=80=9Cthis=E2=80=9D referred to be= ing able to add perl-unicode-collate as input. I suggest joining the two phrases above or otherwise rewording them to make it clearer. > telling user to use perl-unicode-collate 1.29, which is the one > available. >=20 > https://github.com/plk/biber/issues/378 I also suggest mentioning that the resolution of the issue above is why you= =20 are able to drop =E2=80=98biber-sortinithash.patch=E2=80=99. Similarly, I suggest mentioning that issue 239 is also fixed and thus you=20 can drop =E2=80=98biber-fix-encoding-write.patch=E2=80=99. On the other hand, I=E2=80=99m new to the Guix community myself and I notic= ed that=20 most patches don=E2=80=99t have any description beyond the changelog entry,= so an=20 alternate course of action is to remove the description and just using the= =20 changelog entry. I have the impression that I=E2=80=99m more attached to co= mmit=20 descriptions than most here. :-) Either way, this patch is also missing a changelog entry. > --- > gnu/packages/tex.scm | 15 +++++---------- > 1 file changed, 5 insertions(+), 10 deletions(-) >=20 > diff --git a/gnu/packages/tex.scm b/gnu/packages/tex.scm > index b8059b7b73..d86435e1bd 100644 > --- a/gnu/packages/tex.scm > +++ b/gnu/packages/tex.scm > @@ -6927,20 +6927,16 @@ values (strings, macros, or numbers) pasted > together.") ;; checking the Biber/BibLaTeX compatibility matrix in the > BibLaTeX manual ;; at . > (name "biber") > - (version "2.12") > + (version "2.16") > (source (origin > (method git-fetch) > (uri (git-reference > (url "https://github.com/plk/biber/") > (commit (string-append "v" version)))) > (file-name (git-file-name name version)) > - ;; TODO: Patch awaiting inclusion upstream (see: > - ;; https://github.com/plk/biber/issues/239). > - (patches (search-patches "biber-fix-encoding-write.patch" > - "biber-sortinithash.patch")) Since these patches aren=E2=80=99t used anymore, you should also `git rm` t= hem and remove them from `gnu/local.mk`. > (sha256 > (base32 > - =20 "1g1hi6zvf2hmrjly1sidjaxy5440gfqm4p7p3n7kayshnjsmlskx")))) > + =20 "0586q8y1f2k23mvb02ccm3qsb35cwskafksixsjaih7a7xcf5gxx")))) > (build-system perl-build-system) > (arguments > `(#:phases > @@ -6963,6 +6959,7 @@ values (strings, macros, or numbers) pasted=20 together.") > ("perl-datetime-format-builder" ,perl-datetime-format-builder) > ("perl-datetime-calendar-julian" ,perl-datetime-calendar-julian) > ("perl-file-slurper" ,perl-file-slurper) > + ("perl-io-string" ,perl-io-string) > ("perl-ipc-cmd" ,perl-ipc-cmd) > ("perl-ipc-run3" ,perl-ipc-run3) > ("perl-list-allutils" ,perl-list-allutils) I removed perl-io-string from the inputs and I was still able to build the= =20 package. If it is needed, can you add a comment somewhere (not sure if it= =E2=80=99s=20 better to mention it in the commit message or put it as a comment in the=20 code) explaining why it=E2=80=99s necessary? > @@ -6970,10 +6967,8 @@ values (strings, macros, or numbers) pasted > together.") ("perl-mozilla-ca" ,perl-mozilla-ca) > ("perl-regexp-common" ,perl-regexp-common) > ("perl-log-log4perl" ,perl-log-log4perl) > - ;; We cannot use perl-unicode-collate here, because otherwise the > - ;; hardcoded hashes in the tests would differ. See > - ;; https://mail-archive.com/debian-bugs-dist@lists.debian.org/ msg1469249.html > - ;;("perl-unicode-collate" ,perl-unicode-collate) > + ("perl-parse-recdescent" ,perl-parse-recdescent) > + ("perl-unicode-collate" ,perl-unicode-collate) > ("perl-unicode-normalize" ,perl-unicode-normalize) > ("perl-unicode-linebreak" ,perl-unicode-linebreak) > ("perl-encode-eucjpascii" ,perl-encode-eucjpascii) I applied the patch and verified that perl-text-bibtex builds. You=20 mentioned in my GitLab repo that you use biber for your dissertation. With these patches applied, is it working well for you? =2D-=20 Thanks, Thiago