From mboxrd@z Thu Jan 1 00:00:00 1970 From: Ricardo Wurmus Subject: [PATCH 12/14] gnu: Add r-nmf. Date: Tue, 12 Apr 2016 09:51:25 +0200 Message-ID: <1460447487-12570-12-git-send-email-ricardo.wurmus@mdc-berlin.de> References: <1460447487-12570-1-git-send-email-ricardo.wurmus@mdc-berlin.de> Mime-Version: 1.0 Content-Type: text/plain Return-path: Received: from eggs.gnu.org ([2001:4830:134:3::10]:39548) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1apt8f-0005m4-2p for guix-devel@gnu.org; Tue, 12 Apr 2016 03:53:37 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1apt8Z-0004vc-QG for guix-devel@gnu.org; Tue, 12 Apr 2016 03:53:32 -0400 Received: from pegasus.bbbm.mdc-berlin.de ([141.80.25.20]:46349) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1apt8Y-0004vO-PI for guix-devel@gnu.org; Tue, 12 Apr 2016 03:53:27 -0400 Received: from localhost (localhost [127.0.0.1]) by pegasus.bbbm.mdc-berlin.de (Postfix) with ESMTP id 4473A381155 for ; Tue, 12 Apr 2016 09:53:26 +0200 (CEST) Received: from pegasus.bbbm.mdc-berlin.de ([127.0.0.1]) by localhost (pegasus.bbbm.mdc-berlin.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id JFgpaY4FDB5x for ; Tue, 12 Apr 2016 09:53:20 +0200 (CEST) Received: from HTCATWO.mdc-berlin.net (puck.citx.mdc-berlin.de [141.80.36.101]) (using TLSv1 with cipher ECDHE-RSA-AES256-SHA (256/256 bits)) (No client certificate requested) by pegasus.bbbm.mdc-berlin.de (Postfix) with ESMTPS for ; Tue, 12 Apr 2016 09:53:20 +0200 (CEST) In-Reply-To: <1460447487-12570-1-git-send-email-ricardo.wurmus@mdc-berlin.de> List-Id: "Development of GNU Guix and the GNU System distribution." List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-devel-bounces+gcggd-guix-devel=m.gmane.org@gnu.org Sender: "Guix-devel" To: guix-devel@gnu.org * gnu/packages/statistics.scm (r-nmf): New variable. --- gnu/packages/statistics.scm | 38 ++++++++++++++++++++++++++++++++++++++ 1 file changed, 38 insertions(+) diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index 182cf93..419afaa 100644 --- a/gnu/packages/statistics.scm +++ b/gnu/packages/statistics.scm @@ -2120,6 +2120,44 @@ for reproducibility. Notably, convenient default methods greatly facilitate the way current RNG settings can be changed.") (license license:gpl3+))) +(define-public r-nmf + (package + (name "r-nmf") + (version "0.20.6") + (source + (origin + (method url-fetch) + (uri (cran-uri "NMF" version)) + (sha256 + (base32 + "0mmh9bz0zjwd8h9jplz4rq3g94npaqj8s4px51vcv47csssd9k6z")))) + (properties `((upstream-name . "NMF"))) + (build-system r-build-system) + (propagated-inputs + `(("r-cluster" ,r-cluster) + ("r-colorspace" ,r-colorspace) + ("r-digest" ,r-digest) + ("r-doparallel" ,r-doparallel) + ("r-foreach" ,r-foreach) + ("r-ggplot2" ,r-ggplot2) + ("r-gridbase" ,r-gridbase) + ("r-pkgmaker" ,r-pkgmaker) + ("r-rcolorbrewer" ,r-rcolorbrewer) + ("r-registry" ,r-registry) + ("r-reshape2" ,r-reshape2) + ("r-rngtools" ,r-rngtools) + ("r-stringr" ,r-stringr))) + (home-page "http://renozao.github.io/NMF") + (synopsis "Algorithms and framework for nonnegative matrix factorization") + (description + "This package provides a framework to perform Non-negative Matrix +Factorization (NMF). The package implements a set of already published +algorithms and seeding methods, and provides a framework to test, develop and +plug new or custom algorithms. Most of the built-in algorithms have been +optimized in C++, and the main interface function provides an easy way of +performing parallel computations on multicore machines.") + (license license:gpl2+))) + (define-public r-r-methodss3 (package (name "r-r-methodss3") -- 2.1.0