From mboxrd@z Thu Jan 1 00:00:00 1970 From: Philippe Veber Subject: Import of bioconductor data packages. Date: Thu, 15 Aug 2019 22:11:00 +0200 Message-ID: Mime-Version: 1.0 Content-Type: text/plain; charset="UTF-8" Return-path: Received: from eggs.gnu.org ([2001:470:142:3::10]:50212) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1hyM5c-0006Yv-P8 for help-guix@gnu.org; Thu, 15 Aug 2019 16:11:19 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1hyM5a-0005ZR-2t for help-guix@gnu.org; Thu, 15 Aug 2019 16:11:16 -0400 Received: from mail-wr1-x430.google.com ([2a00:1450:4864:20::430]:37222) by eggs.gnu.org with esmtps (TLS1.0:RSA_AES_128_CBC_SHA1:16) (Exim 4.71) (envelope-from ) id 1hyM5Z-0005Ym-RD for help-guix@gnu.org; Thu, 15 Aug 2019 16:11:14 -0400 Received: by mail-wr1-x430.google.com with SMTP id z11so3301699wrt.4 for ; Thu, 15 Aug 2019 13:11:13 -0700 (PDT) List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: help-guix-bounces+gcggh-help-guix=m.gmane.org@gnu.org Sender: "Help-Guix" To: help-guix@gnu.org Hi all, I am trying to import a bioconductor package that depends on a bioconductor data package. While the command for the software package works fine : guix import cran --archive=bioconductor ChIPQC the one for the data package doesn't : $ guix import cran --archive=bioconductor TxDb.Celegans.UCSC.ce6.ensGene error: failed to retrieve package information from " https://cran.r-project.org/web/packages/TxDb.Celegans.UCSC.ce6.ensGene/DESCRIPTION": 404 ("Not Found") I tried reading the code in guix for CRAN import, and it seems that the case for data package has been taken care of (and as a matter of fact there are already several data packages in the distribution), but I can't find the way to invoke it. Thanks for any help! Philippe.