From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from mp0 ([2001:41d0:2:4a6f::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by ms11 with LMTPS id sFuWIdZ2dF/LMwAA0tVLHw (envelope-from ) for ; Wed, 30 Sep 2020 12:15:18 +0000 Received: from aspmx1.migadu.com ([2001:41d0:2:4a6f::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by mp0 with LMTPS id uOV7HdZ2dF8TfAAA1q6Kng (envelope-from ) for ; Wed, 30 Sep 2020 12:15:18 +0000 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by aspmx1.migadu.com (Postfix) with ESMTPS id 974F89404C2 for ; Wed, 30 Sep 2020 12:15:17 +0000 (UTC) Received: from localhost ([::1]:47592 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1kNb0s-0007fS-Vq for larch@yhetil.org; Wed, 30 Sep 2020 08:15:15 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:43386) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1kNaxo-0004tA-U3 for help-guix@gnu.org; Wed, 30 Sep 2020 08:12:04 -0400 Received: from mail-qv1-xf43.google.com ([2607:f8b0:4864:20::f43]:35267) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1kNaxm-0007CI-MG for help-guix@gnu.org; Wed, 30 Sep 2020 08:12:04 -0400 Received: by mail-qv1-xf43.google.com with SMTP id b13so736550qvl.2 for ; Wed, 30 Sep 2020 05:12:02 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=mime-version:references:in-reply-to:from:date:message-id:subject:to :cc; bh=cJwtyWHZtO9KZiQSGZAdCypk7Wk9wQA828GPZJD6Juk=; b=rDC6BSzPWhTDVsdobT5+dccHM05wP+4bEUD4tUltCm51Ek3TRxoHESOs3L8VGGJogH FDnt6RKIe3YRWJRW2q0O/jD9wRPgOwoWY7hwPK2LwEw5riNVcyKPPUsqFj1Fyra0gjF3 f6Nrl2W8hYYXyL/6pNhIRmOI/GH8VX5rYNqQ3Ij35j2JDYKvvdAUyhuNeJULLbY+ZRQV 4V0MtGwD18p9BHrMmuzqJrH5hKZX+4a+dePdMeUnGOViHOaRudSKYRwozo3ei1ouptCU clNEE19WsQeSgBEkfNAD2gQZrpyXtOTAz7L3Zj1egv1EYXd2whspWi++EoPl1UnVKT8C WAbg== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:mime-version:references:in-reply-to:from:date :message-id:subject:to:cc; bh=cJwtyWHZtO9KZiQSGZAdCypk7Wk9wQA828GPZJD6Juk=; b=ESicwKw1e/Sa171tEhiqy5a89+QOZ7cqCZxyGY0iDsfns+Ej2cDGhDJNuERHtlst36 lxqi6riTGyP/JKjudlHaIs1QvwGNFATHMveJqG7AOs6G0asUAZjC9Fx/9xQBuVlmD8+O UIjco4GRGBNvv0Y+irP+RrGIwh0F5EfUasQrEwNlVhzk6nC3TKmERNoPsehfiYySf+jS eU3isCrTi5xxyb8vXjZdk/QX6D595QHblpjuVYwHZEeH8vB9UJ4eRTHs79OUsiZtoMAx 1TbEX/VBVoopwT7wG2EcZpfn3d00b5mVwnhGH9DMpr8IQ5lrAJ46yyHgfSVQHh2mzIUR tX7g== X-Gm-Message-State: AOAM532V7WpAhWgmDkysGc8bH1t7zwL3iBlCZhuMpQGn1bpmRP9OWnWk 2aAHzCzuucOgQ8iyClk/d1lcvUK13tsEh0i8/1c= X-Google-Smtp-Source: ABdhPJxgEyMBhs7tn0W8tDa4RMbxCAJfxrWQrBWI0eWMgjBOPY+qIoexvMwKXu5LQ3tCmBqrL3q1yEA6WQtJLCb3Ke8= X-Received: by 2002:ad4:4af4:: with SMTP id cp20mr1997990qvb.40.1601467921225; Wed, 30 Sep 2020 05:12:01 -0700 (PDT) MIME-Version: 1.0 References: <87r1qk65ez.fsf@gnu.org> <87wo0b3ao7.fsf@inria.fr> <4582e2f82eba477fa84352c004a0ce15@mdc-berlin.de> In-Reply-To: <4582e2f82eba477fa84352c004a0ce15@mdc-berlin.de> From: zimoun Date: Wed, 30 Sep 2020 14:11:50 +0200 Message-ID: Subject: Re: [ext] Re: failed to install the python-umap-learn package To: "Hong.Li@mdc-berlin.de" Content-Type: text/plain; charset="UTF-8" Received-SPF: pass client-ip=2607:f8b0:4864:20::f43; envelope-from=zimon.toutoune@gmail.com; helo=mail-qv1-xf43.google.com X-detected-operating-system: by eggs.gnu.org: No matching host in p0f cache. That's all we know. X-Spam_score_int: -20 X-Spam_score: -2.1 X-Spam_bar: -- X-Spam_report: (-2.1 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, FREEMAIL_FROM=0.001, RCVD_IN_DNSWL_NONE=-0.0001, SPF_HELO_NONE=0.001, SPF_PASS=-0.001 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: help-guix@gnu.org X-Mailman-Version: 2.1.23 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Cc: =?UTF-8?Q?Ludovic_Court=C3=A8s?= , "help-guix@gnu.org" Errors-To: help-guix-bounces+larch=yhetil.org@gnu.org Sender: "Help-Guix" X-Scanner: scn0 Authentication-Results: aspmx1.migadu.com; dkim=pass header.d=gmail.com header.s=20161025 header.b=rDC6BSzP; dmarc=pass (policy=none) header.from=gmail.com; spf=pass (aspmx1.migadu.com: domain of help-guix-bounces@gnu.org designates 209.51.188.17 as permitted sender) smtp.mailfrom=help-guix-bounces@gnu.org X-Spam-Score: -1.71 X-TUID: dil8EFiMgHns On Wed, 30 Sep 2020 at 13:41, Hong.Li@mdc-berlin.de wrote: > $ guix time-machine --commit=cd5406effa34fa5cfda7eb7bbd2ccaf5201cf523 -- package -p guix/new/.guix-profile -i python3 python-umap-learn > Updating channel 'guix' from Git repository at 'https://git.savannah.gnu.org/git/guix.git'... > Updating channel 'guix-bimsb' from Git repository at 'https://github.com/BIMSBbioinfo/guix-bimsb.git'... > Updating channel 'guix-past' from Git repository at 'https://gitlab.inria.fr/guix-hpc/guix-past'... > Updating channel 'guix-bimsb-nonfree' from Git repository at 'https://github.com/BIMSBbioinfo/guix-bimsb-nonfree.git'... [...] > |builder for `/gnu/store/jvffmvaz1rm0q11c57wmsp08h0slj9ym-guix-past.drv' failed to produce output path `/gnu/store/gg8fs00h7vqx29icijxpd7w99z1p8lmf-guix-past' > build of /gnu/store/jvffmvaz1rm0q11c57wmsp08h0slj9ym-guix-past.drv failed The error comes from the channel 'guix-past'. Well, I will investigate later... Therefore, you have to turn off this channel. The simplest is to run: echo "%default-channels" > /tmp/chan.scm guix time-machine --commit=cd5406effa34fa5cfda7eb7bbd2ccaf5201cf523 \ -C /tmp/chan.scm \ -- package -p guix/new/.guix-profile -i python3 python-umap-learn Hope that helps. > [hli@max-login3.mdc-berlin.net:~] $ guix time-machine --commit=cac674d99dc4a332e6210c57ec7f1b8164f66642 -- package -p guix/new/.guix-profile -i python3 python-umap-learn Why this commit? 'python-umap-learn' should be broken > Updating channel 'guix' from Git repository at 'https://git.savannah.gnu.org/git/guix.git'... > Updating channel 'guix-bimsb' from Git repository at 'https://github.com/BIMSBbioinfo/guix-bimsb.git'... > Updating channel 'guix-past' from Git repository at 'https://gitlab.inria.fr/guix-hpc/guix-past'... > Updating channel 'guix-bimsb-nonfree' from Git repository at 'https://github.com/BIMSBbioinfo/guix-bimsb-nonfree.git'... > Computing Guix derivation for 'x86_64-linux'... WARNING: (guix build emacs-build-system): imported module (guix build utils) overrides core binding `delete' | > The following derivation will be built: > /gnu/store/zz2557r32hsq2ksa53ix4ygaskkrs2qi-profile.drv > The following profile hook will be built: > /gnu/store/yaj4m68r6l9jhdb767psz79fm84hb6x6-guix-package-cache.drv > building package cache... > /builder for `/gnu/store/yaj4m68r6l9jhdb767psz79fm84hb6x6-guix-package-cache.drv' failed to produce output path `/gnu/store/9vpcvp00acz4lvglfs1k69a4i05p5hbw-guix-package-cache' > build of /gnu/store/yaj4m68r6l9jhdb767psz79fm84hb6x6-guix-package-cache.drv failed > View build log at '/gnu/var/log/guix/drvs/ya/j4m68r6l9jhdb767psz79fm84hb6x6-guix-package-cache.drv'. > cannot build derivation `/gnu/store/zz2557r32hsq2ksa53ix4ygaskkrs2qi-profile.drv': 1 dependencies couldn't be built I do not know why it returns an error here. What happens if you run: guix time-machine --commit=cac674d99dc4a332e6210c57ec7f1b8164f66642 -- help ? All the best, simon