From mboxrd@z Thu Jan 1 00:00:00 1970 From: zimoun Subject: unbounded variable from `FATAL: kernel too old` ? Date: Wed, 30 May 2018 20:47:49 +0200 Message-ID: Mime-Version: 1.0 Content-Type: text/plain; charset="UTF-8" Return-path: Received: from eggs.gnu.org ([2001:4830:134:3::10]:43647) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1fO68X-0003WD-8P for help-guix@gnu.org; Wed, 30 May 2018 14:47:55 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1fO68W-00071o-9c for help-guix@gnu.org; Wed, 30 May 2018 14:47:53 -0400 Received: from mail-wr0-x229.google.com ([2a00:1450:400c:c0c::229]:36196) by eggs.gnu.org with esmtps (TLS1.0:RSA_AES_128_CBC_SHA1:16) (Exim 4.71) (envelope-from ) id 1fO68W-00071V-0q for help-guix@gnu.org; Wed, 30 May 2018 14:47:52 -0400 Received: by mail-wr0-x229.google.com with SMTP id f16-v6so15215485wrm.3 for ; Wed, 30 May 2018 11:47:51 -0700 (PDT) List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: help-guix-bounces+gcggh-help-guix=m.gmane.org@gnu.org Sender: "Help-Guix" To: help-guix@gnu.org Hi, I am installing the rnaseq Pigx pipeline from https://github.com/BIMSBbioinfo/pigx/tree/master/pipelines/rnaseq I miss something with the Guix installation. `guix environment -l guix.scm` fails because of these unbounded variables: - fastqc - salmon - ghc-pandoc-1 - ghc-pandoc-citeproc-with-pandoc-1 And `guix package -A fastqc' returns nothing but it is visible on the Guix Packages webpage. https://www.gnu.org/software/guix/packages/F/ Then, I have tried `guix pull`, which leads to: building path(s) `/gnu/store/7mw3mxnb5py6g2q6qaqf5mbaqxwr0jz3-perl-5.26.1' FATAL: kernel too old I am not sure what does it mean ? (`uname -r` is 3.0.80-0.7-default) If needed, let me know if you need more information about my system. Thank you for any insight. All the best, simon