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From: zimoun <zimon.toutoune@gmail.com>
To: help-guix <help-guix@gnu.org>
Subject: guix pack -f docker and profile ?
Date: Thu, 16 May 2019 20:26:41 +0200	[thread overview]
Message-ID: <CAJ3okZ1=SehT3FGWN1PNYmfUi-ktSw3vFOSbXFLg+oTr+U_-OQ@mail.gmail.com> (raw)

Dear,

The command line:

  guix pack                 \
            -f docker       \
            -C none         \
            -S /bin=bin     \
            -S /lib=lib     \
            -S /share=share \
            -S /etc=etc     \
            glibc-utf8-locales coreutils tzdata \
            bash r r-<name-it>

creates a Docker image containing the R interpreter and the R package
<name-it>. Nice!

Then:
  docker run -ti --rm --tmpfs /tmp <image-id> R
launches R inside the Docker. Cool!

However you cannot load the R package <name-it> because it is not in
the load path. Which is annoying but expected.

Instead, one needs to make it with 2 steps:
  docker run -ti --rm --tmpfs /tmp <image-id> bash
then find the <hash> from the folder /gnu/store/<hash>-profile to be
able to source it:
  source /gnu/store/<hash>-profile/etc/profile

Now the R library is found:
  R -e 'library(<name-it>)'


Is it possible to directly have the profile under /etc/ ?
Other said, how to correctly expose the environment variables ?


Thank you in advance.


All the best,
simon

             reply	other threads:[~2019-05-16 18:26 UTC|newest]

Thread overview: 3+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2019-05-16 18:26 zimoun [this message]
2019-05-19 14:38 ` guix pack -f docker and profile ? Ludovic Courtès
2019-05-20 13:15   ` zimoun

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