From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from mp1 ([2001:41d0:2:4a6f::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by ms11 with LMTPS id ok+zGoxFc18JZQAA0tVLHw (envelope-from ) for ; Tue, 29 Sep 2020 14:32:44 +0000 Received: from aspmx1.migadu.com ([2001:41d0:2:4a6f::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by mp1 with LMTPS id QDseFoxFc1/4ZwAAbx9fmQ (envelope-from ) for ; Tue, 29 Sep 2020 14:32:44 +0000 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by aspmx1.migadu.com (Postfix) with ESMTPS id CD5509400EF for ; Tue, 29 Sep 2020 14:32:43 +0000 (UTC) Received: from localhost ([::1]:36396 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1kNGKE-00065g-9p for larch@yhetil.org; Tue, 29 Sep 2020 10:09:50 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:48584) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1kNGJx-0005xi-Ed for help-guix@gnu.org; Tue, 29 Sep 2020 10:09:33 -0400 Received: from mail3-relais-sop.national.inria.fr ([192.134.164.104]:14778) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1kNGJs-0005br-JV for help-guix@gnu.org; Tue, 29 Sep 2020 10:09:33 -0400 X-IronPort-AV: E=Sophos;i="5.77,318,1596492000"; d="scan'208";a="360359948" Received: from unknown (HELO ribbon) ([193.50.110.247]) by mail3-relais-sop.national.inria.fr with ESMTP/TLS/DHE-RSA-AES256-GCM-SHA384; 29 Sep 2020 16:09:24 +0200 From: =?utf-8?Q?Ludovic_Court=C3=A8s?= To: Hong.Li@mdc-berlin.de Subject: Re: failed to install the python-umap-learn package References: X-URL: http://www.fdn.fr/~lcourtes/ X-Revolutionary-Date: 8 =?utf-8?Q?Vend=C3=A9miaire?= an 229 de la =?utf-8?Q?R=C3=A9volution?= X-PGP-Key-ID: 0x090B11993D9AEBB5 X-PGP-Key: http://www.fdn.fr/~lcourtes/ludovic.asc X-PGP-Fingerprint: 3CE4 6455 8A84 FDC6 9DB4 0CFB 090B 1199 3D9A EBB5 X-OS: x86_64-pc-linux-gnu Date: Tue, 29 Sep 2020 16:09:24 +0200 In-Reply-To: (Hong's message of "Mon, 21 Sep 2020 11:23:19 +0000") Message-ID: <87r1qk65ez.fsf@gnu.org> User-Agent: Gnus/5.13 (Gnus v5.13) Emacs/27.1 (gnu/linux) MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable Received-SPF: pass client-ip=192.134.164.104; envelope-from=ludovic.courtes@inria.fr; helo=mail3-relais-sop.national.inria.fr X-detected-operating-system: by eggs.gnu.org: First seen = 2020/09/29 10:09:25 X-ACL-Warn: Detected OS = ??? X-Spam_score_int: -68 X-Spam_score: -6.9 X-Spam_bar: ------ X-Spam_report: (-6.9 / 5.0 requ) BAYES_00=-1.9, RCVD_IN_DNSWL_HI=-5, RCVD_IN_MSPIKE_H3=0.001, RCVD_IN_MSPIKE_WL=0.001, SPF_HELO_NONE=0.001, SPF_PASS=-0.001 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: help-guix@gnu.org X-Mailman-Version: 2.1.23 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Cc: "help-guix@gnu.org" Errors-To: help-guix-bounces+larch=yhetil.org@gnu.org Sender: "Help-Guix" X-Scanner: scn0 Authentication-Results: aspmx1.migadu.com; dkim=none; dmarc=none; spf=pass (aspmx1.migadu.com: domain of help-guix-bounces@gnu.org designates 209.51.188.17 as permitted sender) smtp.mailfrom=help-guix-bounces@gnu.org X-Spam-Score: -1.01 X-TUID: TSpN3nc/xOQu Hi, "Hong.Li@mdc-berlin.de" skribis: > I had a failure when installing python-umap-learn in guix. It took very l= ong time in the 'check' phase. > > The error does not change before and after 'guix pull'. Could you please = tell me how to solve this problem? > > Thanks in advance! Please see the screen output below: > > > $ guix package -i python-umap-learn > > The following package will be installed: > python-umap-learn 0.3.10 > > The following derivations will be built: > /gnu/store/4sbifbl79yy6xnbnkvj0hvc3i2mp6jcj-python-umap-learn-0.3.10.d= rv > /gnu/store/ra7xx13ni736p0kvcsbhsl0g9yhy4d68-python-numba-0.46.0.drv > building /gnu/store/ra7xx13ni736p0kvcsbhsl0g9yhy4d68-python-numba-0.46.0.= drv... > - 'check' phasebuilder for `/gnu/store/ra7xx13ni736p0kvcsbhsl0g9yhy4d68-p= ython-numba-0.46.0.drv' failed with exit code 1 > build of /gnu/store/ra7xx13ni736p0kvcsbhsl0g9yhy4d68-python-numba-0.46.0.= drv failed > View build log at '/gnu/var/log/guix/drvs/ra/7xx13ni736p0kvcsbhsl0g9yhy4d= 68-python-numba-0.46.0.drv'. > guix package: error: build of `/gnu/store/ra7xx13ni736p0kvcsbhsl0g9yhy4d6= 8-python-numba-0.46.0.drv' failed It would seem that one of the tests of python-numba is failing, perhaps in a non-deterministic way. As a stopgap, you should be able to run: guix install python-umap-learn --without-tests=3Dpython-numba Note that =E2=80=98--without-tests=E2=80=99 was added just a couple of days= ago, so you may need to run =E2=80=98guix pull=E2=80=99 to get a recent-enough Guix: https://guix.gnu.org/manual/devel/en/html_node/Package-Transformation-Opt= ions.html HTH, Ludo=E2=80=99.