From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from mp0 ([2001:41d0:2:4a6f::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by ms0.migadu.com with LMTPS id COFsLK0ZomGaDAAAgWs5BA (envelope-from ) for ; Sat, 27 Nov 2021 12:42:37 +0100 Received: from aspmx1.migadu.com ([2001:41d0:2:4a6f::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by mp0 with LMTPS id wFs0KK0ZomEVdQAA1q6Kng (envelope-from ) for ; Sat, 27 Nov 2021 11:42:37 +0000 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by aspmx1.migadu.com (Postfix) with ESMTPS id 30B94342C3 for ; Sat, 27 Nov 2021 12:42:37 +0100 (CET) Received: from localhost ([::1]:39104 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1mqw6G-0001fO-5U for larch@yhetil.org; Sat, 27 Nov 2021 06:42:36 -0500 Received: from eggs.gnu.org ([209.51.188.92]:60250) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1mqw5x-0001fA-IO for help-guix@gnu.org; Sat, 27 Nov 2021 06:42:17 -0500 Received: from sv-2s11.infcs.de ([194.95.66.48]:40088 helo=ux-2s-mailproxy.inf.h-brs.de) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1mqw5q-00087P-Oq for help-guix@gnu.org; Sat, 27 Nov 2021 06:42:14 -0500 Received: from gyps.h-brs.de (p5797302f.dip0.t-ipconnect.de [87.151.48.47]) (authenticated bits=0) by ux-2s-mailproxy.inf.h-brs.de (8.15.2/8.15.2/Debian-8ska0) with ESMTPSA id 1ARBg7ct001544 (version=TLSv1.2 cipher=ECDHE-RSA-AES256-GCM-SHA384 bits=256 verify=NOT) for ; Sat, 27 Nov 2021 12:42:07 +0100 User-agent: mu4e 1.7.4; emacs 27.2 From: Alexander Asteroth To: "help-guix@gnu.org" Subject: jupyter failing while trying to modify /gnu/store Date: Sat, 27 Nov 2021 12:40:59 +0100 Message-ID: <87ee719663.fsf@h-brs.de> MIME-Version: 1.0 Content-Type: text/plain X-Auth: by SMTP AUTH @ ux-2s11 X-MIMEDefang-Info-ge: Gescannt in Inf@FH-BRS, Regeln s. MiniFAQ E-Mail/Mailscanner X-Scanned-By: MIMEDefang @ FB02 @ H-BRS Received-SPF: pass client-ip=194.95.66.48; envelope-from=alexander.asteroth@h-brs.de; helo=ux-2s-mailproxy.inf.h-brs.de X-Spam_score_int: -18 X-Spam_score: -1.9 X-Spam_bar: - X-Spam_report: (-1.9 / 5.0 requ) BAYES_00=-1.9, SPF_HELO_NONE=0.001, SPF_PASS=-0.001 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: help-guix@gnu.org X-Mailman-Version: 2.1.29 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: help-guix-bounces+larch=yhetil.org@gnu.org Sender: "Help-Guix" X-Migadu-Flow: FLOW_IN ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=yhetil.org; s=key1; t=1638013357; h=from:from:sender:sender:reply-to:subject:subject:date:date: message-id:message-id:to:to:cc:mime-version:mime-version: content-type:content-type:list-id:list-help:list-unsubscribe: list-subscribe:list-post; bh=wTsWtBFxJxfoKCBWzxe7NPMqzYSEiqZ56dGMI+MUvoY=; b=Q67G1SSTXoppGVUMLEVmh/FcRPgLrroW8doX1saX4NoEKH8gzjt+ZVtiSpYX6Ec4fUyHCl Lq7ZyJjuwUmnWi7gzSmIK8iFLs8efgHZNtrCbSas5RzYEkkVlayEztWazA+P4wAJl3vVL0 JyyjOJ3fSLtJ05gL3EdmLmLJtSDNHRR2j9RzvGVzKfNHTJC37DwchfPHo2CFwD81XxkSeU SMzJs7aQaTF+E1VU+1aQadnWLVQVxCv4p+JX8XDRzeB4AqPeTRmHVwrKvCzUsGb1COJ48Y 2Wjm/fADmUedB7bKyKEMR7A0FaEIk7impqbZHf5AvPnVaQ1mxaEEOMz+ZstjDg== ARC-Seal: i=1; s=key1; d=yhetil.org; t=1638013357; a=rsa-sha256; cv=none; b=oTbgBfsH54OoIG/FLnS4C2DLthLxW1OJWCSuQliY/61SWo9sXvlc65qjkcrjR4M78Plonn bK+ogG1h5ScMWf/t+ry8XDE69RON508Fyf+IUGmBn2utxgT2CWm2EfZTf4D1R8YgEbf+aE NN2CzAI0PDHgh1ASpFjbjPvE+ssg0pqTaTdHz7bPPorl3bNabM4QfeQEsfw5hQu4ftT/ds XsV/dzvlI52TYPnTxkGmF0nUR4vbLTNw7jf0ezIndAjfWoxWD9hmYiKD9/1whDvCXL+ts/ u1WCuEtNuU6bBHqQXZh/mxVItvkjXSwyt8VJZh5YGKkdOSjvpWKdwEZ/C3P8/w== ARC-Authentication-Results: i=1; aspmx1.migadu.com; dkim=none; spf=pass (aspmx1.migadu.com: domain of help-guix-bounces@gnu.org designates 209.51.188.17 as permitted sender) smtp.mailfrom=help-guix-bounces@gnu.org X-Migadu-Spam-Score: -2.81 Authentication-Results: aspmx1.migadu.com; dkim=none; dmarc=fail reason="SPF not aligned (relaxed), No valid DKIM" header.from=h-brs.de (policy=none); spf=pass (aspmx1.migadu.com: domain of help-guix-bounces@gnu.org designates 209.51.188.17 as permitted sender) smtp.mailfrom=help-guix-bounces@gnu.org X-Migadu-Queue-Id: 30B94342C3 X-Spam-Score: -2.81 X-Migadu-Scanner: scn1.migadu.com X-TUID: meL023cBN8Vu Dear all, yesterday I added jupyter to my profile and it worked perfectly fine. Overnight I shut down the computer and rebooted today. Now jupyter refuses to start with the messages below. It seems that jupyter-notebook tries to create directories (or modifiy them) in the location it is installed wich is mounted ro. I have no idea why this didn't happen yesterday but it seems that there is some misconfiguration somewhere... Cheers, Alex PS: same effect with jupyterlab from the guix-science channel. ------------------------------- ~$ jupyter-notebook Traceback (most recent call last): File "/gnu/store/1v8dgchnis87a4p3g9i3j1ayv0dfr4ds-python-notebook-6.3.0/bin/.jupyter-notebook-real", line 11, in load_entry_point('notebook==6.3.0', 'console_scripts', 'jupyter-notebook')() File "/gnu/store/8ncan0ipzb240h23fwfspdhrzkzdw277-python-jupyter-core-4.7.1/lib/python3.8/site-packages/jupyter_core/application.py", line 254, in launch_instance return super(JupyterApp, cls).launch_instance(argv=argv, **kwargs) File "/gnu/store/i037rnmqzwcc7nrgcswzb8dcckfrngzp-python-traitlets-4.3.3/lib/python3.8/site-packages/traitlets/config/application.py", line 663, in launch_instance app.initialize(argv) File "/gnu/store/f7y0fd230nc6l2qwq58g7q26rlkwjkf3-python-decorator-5.0.9/lib/python3.8/site-packages/decorator.py", line 232, in fun return caller(func, *(extras + args), **kw) File "/gnu/store/i037rnmqzwcc7nrgcswzb8dcckfrngzp-python-traitlets-4.3.3/lib/python3.8/site-packages/traitlets/config/application.py", line 87, in catch_config_error return method(app, *args, **kwargs) File "/gnu/store/1v8dgchnis87a4p3g9i3j1ayv0dfr4ds-python-notebook-6.3.0/lib/python3.8/site-packages/notebook/notebookapp.py", line 2122, in initialize super().initialize(argv) File "/gnu/store/f7y0fd230nc6l2qwq58g7q26rlkwjkf3-python-decorator-5.0.9/lib/python3.8/site-packages/decorator.py", line 232, in fun return caller(func, *(extras + args), **kw) File "/gnu/store/i037rnmqzwcc7nrgcswzb8dcckfrngzp-python-traitlets-4.3.3/lib/python3.8/site-packages/traitlets/config/application.py", line 87, in catch_config_error return method(app, *args, **kwargs) File "/gnu/store/8ncan0ipzb240h23fwfspdhrzkzdw277-python-jupyter-core-4.7.1/lib/python3.8/site-packages/jupyter_core/application.py", line 229, in initialize self.migrate_config() File "/gnu/store/8ncan0ipzb240h23fwfspdhrzkzdw277-python-jupyter-core-4.7.1/lib/python3.8/site-packages/jupyter_core/application.py", line 155, in migrate_config migrate() File "/gnu/store/8ncan0ipzb240h23fwfspdhrzkzdw277-python-jupyter-core-4.7.1/lib/python3.8/site-packages/jupyter_core/migrate.py", line 244, in migrate ensure_dir_exists(env['jupyter_config']) File "/gnu/store/8ncan0ipzb240h23fwfspdhrzkzdw277-python-jupyter-core-4.7.1/lib/python3.8/site-packages/jupyter_core/utils/__init__.py", line 11, in ensure_dir_exists os.makedirs(path, mode=mode) File "/gnu/store/sd2ic7bpv8fx3imy1j8xcjclx71sv6q0-python-3.8.2/lib/python3.8/os.py", line 213, in makedirs makedirs(head, exist_ok=exist_ok) File "/gnu/store/sd2ic7bpv8fx3imy1j8xcjclx71sv6q0-python-3.8.2/lib/python3.8/os.py", line 213, in makedirs makedirs(head, exist_ok=exist_ok) File "/gnu/store/sd2ic7bpv8fx3imy1j8xcjclx71sv6q0-python-3.8.2/lib/python3.8/os.py", line 213, in makedirs makedirs(head, exist_ok=exist_ok) [Previous line repeated 7 more times] File "/gnu/store/sd2ic7bpv8fx3imy1j8xcjclx71sv6q0-python-3.8.2/lib/python3.8/os.py", line 223, in makedirs mkdir(name, mode) OSError: [Errno 30] Read-only file system: '/home/[user]/.guix-profile/etc/jupyter:'