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[87.154.211.47]) by smtp.gmail.com with ESMTPSA id b197sm15190372wmb.24.2021.11.08.01.13.58 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Mon, 08 Nov 2021 01:13:58 -0800 (PST) References: <878ry66ssq.fsf@gmail.com> <87tugsq3em.fsf@gmail.com> <87zgqi43bd.fsf@gmail.com> User-agent: mu4e 1.6.6; emacs 28.0.60 From: =?utf-8?Q?Th=C3=A9o?= Maxime Tyburn To: Efraim Flashner Subject: Re: Using julia in guix Date: Sun, 07 Nov 2021 17:58:28 +0100 In-reply-to: Message-ID: <87a6if9fhm.fsf@gmail.com> MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable X-Host-Lookup-Failed: Reverse DNS lookup failed for 2a00:1450:4864:20::32d (failed) Received-SPF: pass client-ip=2a00:1450:4864:20::32d; envelope-from=theo.tyburn@gmail.com; helo=mail-wm1-x32d.google.com X-Spam_score_int: -2 X-Spam_score: -0.3 X-Spam_bar: / X-Spam_report: (-0.3 / 5.0 requ) BAYES_00=-1.9, DATE_IN_PAST_12_24=1.049, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, FREEMAIL_FROM=0.001, PDS_HP_HELO_NORDNS=0.001, RCVD_IN_DNSWL_NONE=-0.0001, RDNS_NONE=0.793, SPF_HELO_NONE=0.001, SPF_PASS=-0.001 autolearn=no autolearn_force=no X-Spam_action: no action X-BeenThere: help-guix@gnu.org X-Mailman-Version: 2.1.29 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Cc: help guix Errors-To: help-guix-bounces+larch=yhetil.org@gnu.org Sender: "Help-Guix" X-Migadu-Flow: FLOW_IN ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=yhetil.org; s=key1; t=1636363301; h=from:from:sender:sender:reply-to:subject:subject:date:date: message-id:message-id:to:to:cc:cc:mime-version:mime-version: content-type:content-type: content-transfer-encoding:content-transfer-encoding: in-reply-to:in-reply-to:references:references:list-id:list-help: list-unsubscribe:list-subscribe:list-post:dkim-signature; bh=kROQrrXQfv1dmpIkfSLF3y7RbIxMN80RWUrrBAXGEls=; b=JeodETDjNyWUj5oqSWyUfAk9MWvQTl1e/MGT1hGiLcdA4U13SsmQmhseiQakQ76p9CFBPy aaT5IEguN7sxKhVZkfnRYw95gyGk/799Ll8dV43EykahK4srGyK7vIDbC+p5EB07JeY5uF iU2vNEFher9yFToXbhqZs+dAqkSdXU7z//5REnThlsSJtqUWJscGBGaxJs7muZxMRf6lHV V13S4JzDk7unoWAkch7NWgMMkp9ernVWU2cfD2Pv0FmuYijCbq+USEwfkKfmiTDCFfya9w VcAdRGJ6Nw55l9mORYPXZqGdoNWgZCwTfW8GhYcHBa3Dm37V6Y6ReWjxJGX9Xw== ARC-Seal: i=1; s=key1; d=yhetil.org; t=1636363301; a=rsa-sha256; cv=none; b=NHUqiFXDB7uc23GZ9Qn0CZznInxW2SUpogrMyDQljxUI7DlEGEk3AhdbX3u15RliWQrqlR wVrEGfIOM5Lrzr20skH6GoMeODn+cNwS/WMyeYgf9MgcIHI74my0zFCjCJt3GT/AaCentN n7YNzh399seFvEv2mlCzf9SWTOMVGJ1W6VsQKqcoJw1tRWr9Wzwp1wBhZkMGG9+4yRx3yc q8Lp5KSlNro5qjW6F7aQmtc3G4UhbzK6TQdhHNg/sy4GPhKitvuCQCMAguEJusUCO/Xy7j Cz7fRWo0rRw1I1/kVBDn/cyli285ddj0nQBm0XTMCJvgDfCVnTtUVMuTFAaYQQ== ARC-Authentication-Results: i=1; aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=gmail.com header.s=20210112 header.b=gl83A+0J; dmarc=fail reason="SPF not aligned (relaxed)" header.from=gmail.com (policy=none); spf=pass (aspmx1.migadu.com: domain of help-guix-bounces@gnu.org designates 209.51.188.17 as permitted sender) smtp.mailfrom=help-guix-bounces@gnu.org X-Migadu-Spam-Score: 0.18 Authentication-Results: aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=gmail.com header.s=20210112 header.b=gl83A+0J; dmarc=fail reason="SPF not aligned (relaxed)" header.from=gmail.com (policy=none); spf=pass (aspmx1.migadu.com: domain of help-guix-bounces@gnu.org designates 209.51.188.17 as permitted sender) smtp.mailfrom=help-guix-bounces@gnu.org X-Migadu-Queue-Id: 1862B35CC5 X-Spam-Score: 0.18 X-Migadu-Scanner: scn0.migadu.com X-TUID: +PnUdLd5aNVi Efraim Flashner writes: >> So I run "./pre-inst-env guix shell julia". But apparently julia wasn=E2= =80=99t >> rebuilt as I did that. So when I then run "./pre-inst-env julia" I am >> probabilly using the unpatched julia version, right ? >> If I install say "julia-docstringextensions" with guix and then in julia >> add it with Pkg it still gets installed the usual way. >> How can I use the julia package as defined in the patch ? > > I looked at the patch again. It doesn't actually affect the julia > package itself but packages built using the julia-build-system. Right > now I'm trying to test it with './pre-inst-env guix shell julia > julia-pyplot julia-staticarrays julia-statsbase' and then using the > julia from that shell to try importing other packages to finish loading > a different project. Ok it seems I am doing it right then. When I run "./pre-inst-env guix shell julia julia-gr" then "julia" and finally "pkg> add Plots" then Pkg just reinstalls GR as a dependency of Plots. If I run "pkg> add GR" the GR package also gets reinstalled. With the patch it should use GR from the guix package instead, right ? Maybe this has to do with newer version of GR being available ?