From: Kyle Andrews <kyle@posteo.net>
To: help-guix\@gnu.org <help-guix@gnu.org>
Subject: Need some help packaging parts of a scientific workflow
Date: Wed, 22 Mar 2023 21:29:38 +0000 [thread overview]
Message-ID: <874jqcs4s7.fsf@posteo.net> (raw)
Dear Guix,
Part of my scientific workflow involves compiling a small Racket script
for a command line program into its executable and placing that on
PATH. I had bundled this script inside an R package which made sure it
got compiled and everything was correctly configured at library load
time.
From hanging around here for a bit, I have learned this practice is
probably a bad thing for reproducibility. I should separate my support
programs out from my R package rather than leaving them bundled in.
From reading the documentation a lot, I think the actual compilation
step can be done using the "invoke" procedure like so:
```
(invoke "raco" "exe" "{package_location}/custom-shell-tool.rkt")
```
What I'm struggling with the most is understanding all the boilerplate
code I need to place around that fundamental call.
Below is a text-painting of the state of my misunderstanding:
```
(package
(name "custom-shell-tool")
(version "1")
(source
(local-file "package_location")) ; how to refer to local files?
(build-system copy-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(add-before 'install 'compile
(lambda _
(invoke "raco" "exe"
(string-append
#$package-folder ; how to refer to the build itself?
"custom-shell-tool.rkt"))))))
#:install-plan
#~'(("custom-shell-tool" "bin/")))
(home-page #f)
(synopsis
"A custom shell tool needed only for the niche workflows I write")
(description "This package is different from the ones in Guix.")
(license #f))
```
Would you please help me translate this text painting into a working
package?
I'm especially interested in figuring out how I can productively learn
to experiment productively with this stuff for myself.
Thanks for your help,
Kyle
next reply other threads:[~2023-03-23 0:14 UTC|newest]
Thread overview: 3+ messages / expand[flat|nested] mbox.gz Atom feed top
2023-03-22 21:29 Kyle Andrews [this message]
2023-03-23 21:30 ` Need some help packaging parts of a scientific workflow Philip McGrath
2023-03-29 4:46 ` Kyle
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