From: Lars-Dominik Braun <ldb@leibniz-psychology.org>
To: Simon Tournier <zimon.toutoune@gmail.com>
Cc: guix-science@gnu.org, Simon Tournier <simon.tournier@u-paris.fr>,
lars@6xq.net
Subject: Re: [PATCH] Add draft post "CRAN, a practical example for being reproducible at large scale using GNU Guix".
Date: Wed, 7 Dec 2022 09:36:29 +0100 [thread overview]
Message-ID: <Y5BQjYCg37m83zCx@zpidnb93> (raw)
In-Reply-To: <86y1rkitkk.fsf@gmail.com>
[-- Attachment #1.1: Type: text/plain, Size: 477 bytes --]
Hi Simon,
> Applied, thanks. It is under drafts/ [1]. Last round proofread before
> publishing. On Friday?
Friday sounds good. I’m attching minor changes to the synax highlighting.
Thanks,
Lars
--
Lars-Dominik Braun
Wissenschaftlicher Mitarbeiter/Research Associate
www.leibniz-psychology.org
ZPID - Leibniz-Institut für Psychologie /
ZPID - Leibniz Institute for Psychology
Universitätsring 15
D-54296 Trier - Germany
Tel.: +49–651–201-4964
[-- Attachment #1.2: 0001-reproducible-cran-Fix-console-syntax-highlighting.patch --]
[-- Type: text/plain, Size: 1546 bytes --]
From f1019fa43a34a9cf5e394c86f8389dd6ce4b07dc Mon Sep 17 00:00:00 2001
From: Lars-Dominik Braun <ldb@leibniz-psychology.org>
Date: Wed, 7 Dec 2022 09:33:21 +0100
Subject: [PATCH] reproducible-cran: Fix console syntax highlighting.
* drafts/reproducible-cran.md: Add $ symbols to the beginning of line.
---
drafts/reproducible-cran.md | 6 +++---
1 file changed, 3 insertions(+), 3 deletions(-)
diff --git a/drafts/reproducible-cran.md b/drafts/reproducible-cran.md
index c759b02..31e3e2a 100644
--- a/drafts/reproducible-cran.md
+++ b/drafts/reproducible-cran.md
@@ -32,7 +32,7 @@ in Guix proper, would look like this:
3. Run your code.
```console
- guix shell -m manifest.scm -- R -e 'library(zoid)'
+ $ guix shell -m manifest.scm -- R -e 'library(zoid)'
```
Although Guix displays hints which modules are missing when trying to
@@ -115,14 +115,14 @@ Using guix-cran requires the following steps:
3. Run:
```console
- guix time-machine -C channels.scm -- shell -m manifest.scm -- R -e 'library(zoid)'
+ $ guix time-machine -C channels.scm -- shell -m manifest.scm -- R -e 'library(zoid)'
```
For true reproducibility it’s necessary to pin the channels to a
specific commit by running
```console
-guix time-machine -C channels.scm -- describe -f channels > channels.pinned.scm
+$ guix time-machine -C channels.scm -- describe -f channels > channels.pinned.scm
```
once and using `channels.pinned.scm` instead of `channels.scm` from there on.
--
2.38.1
[-- Attachment #2: signature.asc --]
[-- Type: application/pgp-signature, Size: 659 bytes --]
next prev parent reply other threads:[~2022-12-07 8:37 UTC|newest]
Thread overview: 14+ messages / expand[flat|nested] mbox.gz Atom feed top
2022-12-06 7:53 [PATCH] Add draft post "CRAN, a practical example for being reproducible at large scale using GNU Guix" Lars-Dominik Braun
2022-12-06 12:51 ` Simon Tournier
2022-12-07 7:44 ` Efraim Flashner
2022-12-07 8:39 ` Lars-Dominik Braun
2022-12-07 11:11 ` Simon Tournier
2022-12-07 8:36 ` Lars-Dominik Braun [this message]
2022-12-13 13:53 ` Ludovic Courtès
2022-12-13 16:34 ` zimoun
2022-12-16 8:00 ` Lars-Dominik Braun
2022-12-16 8:58 ` Ludovic Courtès
2022-12-17 9:53 ` Lars-Dominik Braun
2022-12-17 11:43 ` Simon Tournier
2022-12-19 15:06 ` Lars-Dominik Braun
2022-12-21 14:43 ` Ludovic Courtès
Reply instructions:
You may reply publicly to this message via plain-text email
using any one of the following methods:
* Save the following mbox file, import it into your mail client,
and reply-to-all from there: mbox
Avoid top-posting and favor interleaved quoting:
https://en.wikipedia.org/wiki/Posting_style#Interleaved_style
List information: https://guix.gnu.org/
* Reply using the --to, --cc, and --in-reply-to
switches of git-send-email(1):
git send-email \
--in-reply-to=Y5BQjYCg37m83zCx@zpidnb93 \
--to=ldb@leibniz-psychology.org \
--cc=guix-science@gnu.org \
--cc=lars@6xq.net \
--cc=simon.tournier@u-paris.fr \
--cc=zimon.toutoune@gmail.com \
/path/to/YOUR_REPLY
https://kernel.org/pub/software/scm/git/docs/git-send-email.html
* If your mail client supports setting the In-Reply-To header
via mailto: links, try the mailto: link
Be sure your reply has a Subject: header at the top and a blank line
before the message body.
This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox;
as well as URLs for read-only IMAP folder(s) and NNTP newsgroup(s).