From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from mp0 ([2001:41d0:2:4a6f::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by ms11 with LMTPS id ANhqEl+zGF9ySwAA0tVLHw (envelope-from ) for ; Wed, 22 Jul 2020 21:45:03 +0000 Received: from aspmx1.migadu.com ([2001:41d0:2:4a6f::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by mp0 with LMTPS id 6A1RDl+zGF/zcgAA1q6Kng (envelope-from ) for ; Wed, 22 Jul 2020 21:45:03 +0000 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by aspmx1.migadu.com (Postfix) with ESMTPS id B2443940223 for ; Wed, 22 Jul 2020 21:45:02 +0000 (UTC) Received: from localhost ([::1]:42702 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1jyMXt-0007Kx-My for larch@yhetil.org; Wed, 22 Jul 2020 17:45:01 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:56052) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1jyMXj-0007Kk-Cd for guix-science@gnu.org; Wed, 22 Jul 2020 17:44:51 -0400 Received: from mail3-relais-sop.national.inria.fr ([192.134.164.104]:49344) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1jyMXg-0007ZC-HR for guix-science@gnu.org; Wed, 22 Jul 2020 17:44:50 -0400 X-IronPort-AV: E=Sophos;i="5.75,383,1589234400"; d="scan'208";a="355062967" Received: from 91-160-117-201.subs.proxad.net (HELO ribbon) ([91.160.117.201]) by mail3-relais-sop.national.inria.fr with ESMTP/TLS/DHE-RSA-AES256-GCM-SHA384; 22 Jul 2020 23:44:42 +0200 From: =?utf-8?Q?Ludovic_Court=C3=A8s?= To: Konrad Hinsen Cc: Subject: Re: Workflows with SciPipe References: <875zaiqpc0.fsf@inria.fr> <9daa1c5e-bcb6-4521-8e1e-632cd01cbf61@CNREXCMBX07P.core-res.rootcore.local> X-URL: http://www.fdn.fr/~lcourtes/ X-Revolutionary-Date: 5 Thermidor an 228 de la =?utf-8?Q?R=C3=A9volution?= X-PGP-Key-ID: 0x090B11993D9AEBB5 X-PGP-Key: http://www.fdn.fr/~lcourtes/ludovic.asc X-PGP-Fingerprint: 3CE4 6455 8A84 FDC6 9DB4 0CFB 090B 1199 3D9A EBB5 X-OS: x86_64-pc-linux-gnu Date: Wed, 22 Jul 2020 23:44:42 +0200 In-Reply-To: <9daa1c5e-bcb6-4521-8e1e-632cd01cbf61@CNREXCMBX07P.core-res.rootcore.local> (Konrad Hinsen's message of "Wed, 22 Jul 2020 10:28:14 +0200") Message-ID: <87d04ngr79.fsf@gnu.org> User-Agent: Gnus/5.13 (Gnus v5.13) Emacs/26.3 (gnu/linux) MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable Received-SPF: pass client-ip=192.134.164.104; envelope-from=ludovic.courtes@inria.fr; helo=mail3-relais-sop.national.inria.fr X-detected-operating-system: by eggs.gnu.org: First seen = 2020/07/22 17:44:43 X-ACL-Warn: Detected OS = ??? X-Spam_score_int: -68 X-Spam_score: -6.9 X-Spam_bar: ------ X-Spam_report: (-6.9 / 5.0 requ) BAYES_00=-1.9, RCVD_IN_DNSWL_HI=-5, RCVD_IN_MSPIKE_H3=-0.01, RCVD_IN_MSPIKE_WL=-0.01, SPF_HELO_NONE=0.001, SPF_PASS=-0.001 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: guix-science@gnu.org X-Mailman-Version: 2.1.23 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-science-bounces+larch=yhetil.org@gnu.org Sender: "Guix-Science" X-Scanner: scn0 Authentication-Results: aspmx1.migadu.com; dkim=none; dmarc=none; spf=pass (aspmx1.migadu.com: domain of guix-science-bounces@gnu.org designates 209.51.188.17 as permitted sender) smtp.mailfrom=guix-science-bounces@gnu.org X-Spam-Score: -1.01 X-TUID: Ej/FbOBWakqE Hello! Konrad Hinsen skribis: >> Le 20 juil. 2020 =C3=A0 15:38, Ludovic Court=C3=A8s =20 >>=20 >> SciPipe is implemented as a Go library. Although the article mentions >> reproducibility, SciPipe seems to not take care of software deployment. > > It doesn=E2=80=99t. But since it should be easy to package in Guix... no = problem! ;-) Right! It does mean that deployment is left as an exercise to the user, though. > Some background information: SciPipe is part of the thesis work of Samuel= Lampa. I happened to be a member of his PhD jury, and in the end I invited= him to write this paper for the =E2=80=9CScientific Programming=E2=80=9D d= epartment of CiSE. Oh, it=E2=80=99s a small world, thanks for the info! Ludo=E2=80=99.