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From: Ludovic =?UTF-8?Q?Court=C3=A8s?= Date: Thu, 29 Aug 2024 17:38:43 +0200 Message-ID: X-Mailer: git-send-email 2.45.2 MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+larch=yhetil.org@gnu.org Sender: guix-patches-bounces+larch=yhetil.org@gnu.org X-Migadu-Country: US X-Migadu-Flow: FLOW_IN X-Spam-Score: -8.08 X-Migadu-Queue-Id: A660B22612 X-Migadu-Scanner: mx10.migadu.com X-Migadu-Spam-Score: -8.08 X-TUID: PB7uCvsX0xuj Hello Guix! The impetus for this patch series is that PETSc fails to build on ‘core-updates’ (soon to be merged) and it’s pretty critical in applied maths and HPC: --8<---------------cut here---------------start------------->8--- Using MAKE: /gnu/store/lc6r1mh0jlcwixjziiw1zsx1my478rv1-make-4.4.1/bin/make Using MAKEFLAGS: -j16 -l96.0 w -- PETSC_DIR=/tmp/guix-build-petsc-3.16.1.drv-0/petsc-3.16.1 PETSC_ARCH=arch-linux-c-opt MAKE_NP=16 ========================================== make[3]: Entering directory '/tmp/guix-build-petsc-3.16.1.drv-0/petsc-3.16.1' /gnu/store/nvpcidxh4wqp5prdlyfsbcymg67xqqn9-python-3.10.7/bin/python3 ./config/gmakegen.py --petsc-arch=arch-linux-c-opt /gnu/store/nvpcidxh4wqp5prdlyfsbcymg67xqqn9-python-3.10.7/bin/python3 /tmp/guix-build-petsc-3.16.1.drv-0/petsc-3.16.1/config/gmakegentest.py --petsc-dir=/tmp/guix-build-petsc-3.16.1.drv-0/petsc-3.16.1 --petsc-arch=arch-linux-c-opt --testdir=./arch-linux-c-opt/tests make[3]: *** No rule to make target 'w'. Stop. make[3]: Leaving directory '/tmp/guix-build-petsc-3.16.1.drv-0/petsc-3.16.1' make[2]: *** [/tmp/guix-build-petsc-3.16.1.drv-0/petsc-3.16.1/lib/petsc/conf/rules:50: libs] Error 2 make[2]: Leaving directory '/tmp/guix-build-petsc-3.16.1.drv-0/petsc-3.16.1' egrep: warning: egrep is obsolescent; using grep -E egrep: warning: egrep is obsolescent; using grep -E **************************ERROR************************************* Error during compile, check arch-linux-c-opt/lib/petsc/conf/make.log Send it and arch-linux-c-opt/lib/petsc/conf/configure.log to petsc-maint@mcs.anl.gov ******************************************************************** make[1]: *** [makefile:40: all] Error 1 make: *** [GNUmakefile:9: all] Error 2 error: in phase 'build': uncaught exception: %exception #<&invoke-error program: "make" arguments: ("MAKE_NP=16") exit-status: 2 term-signal: #f stop-signal: #f> phase `build' failed after 9.7 seconds command "make" "MAKE_NP=16" failed with status 2 build process 18 exited with status 256 builder for `/gnu/store/wxzwzjlcq10grqrjl9w144fv3myr0kf9-petsc-3.16.1.drv' failed with exit code 1 --8<---------------cut here---------------end--------------->8--- (From .) Ironically I tested this on top of today’s ‘master’ but I’m hopeful that it’ll work on ‘core-updates’ (because of this, I think we should get this series merged shortly once ‘core-updates’ is merged). I rebuilt all dependents, but ‘fenics’ and its dependents remain broken: fenics, python-vedo, and python-dolfin-adjoint. Thanks, Ludo’. Ludovic Courtès (8): gnu: petsc: Update to 3.21.4. gnu: python-petsc4py: Update to 3.21.4. gnu: slepc: Update to 3.21.1. gnu: python-slepc4py: Update to 3.21.1. gnu: petsc: Make ‘petscvariables’ reproducible. gnu: sundials: Upgrade to 7.1.1. gnu: sundials, sundials-openmpi: Use gexps. gnu: dealii: Update to 9.6.0. gnu/packages/maths.scm | 190 ++++++++++++++++++++++------------------- 1 file changed, 100 insertions(+), 90 deletions(-) base-commit: d5312370b46ace47e138d84e1bb28e5651cee94b -- 2.45.2