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(license license:lgpl2.0+))) +(define-public r-bumpymatrix + (package + (name "r-bumpymatrix") + (version "1.8.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "BumpyMatrix" version)) + (sha256 + (base32 + "021xn5d08phmwv6g8a5d4ap5kcf5syhm6vpr784l4k54lflssr5i")))) + (properties `((upstream-name . "BumpyMatrix"))) + (build-system r-build-system) + (propagated-inputs (list r-iranges r-matrix r-s4vectors)) + (native-inputs (list r-knitr)) + (home-page "https://bioconductor.org/packages/BumpyMatrix") + (synopsis "Bumpy matrix of non-scalar objects") + (description + " +@code{BumpyMatrix} class and subclasses for storing non-scalar objects in matrix entries. +This is akin to a ragged array but the raggedness is in the third dimension, +much like a bumpy surface - hence the name. Of particular interest is the +@code{BumpyDataFrameMatrix,} where each entry is a Bioconductor data frame. +This allows us to naturally represent multivariate data in a format that is +compatible with two-dimensional containers like the @code{SummarizedExperiment} +and @code{MultiAssayExperiment} objects.") + (license license:expat))) + (define-public r-bumphunter (package (name "r-bumphunter") base-commit: 39fa1ef033fda82cb1d122e0d1675b51acb1db34 -- 2.34.1