From: Sharlatan Hellseher <sharlatanus@gmail.com>
To: 69924@debbugs.gnu.org
Cc: Sharlatan Hellseher <sharlatanus@gmail.com>,
Lars-Dominik Braun <lars@6xq.net>, Marius Bakke <marius@gnu.org>,
Munyoki Kilyungi <me@bonfacemunyoki.com>,
Sharlatan Hellseher <sharlatanus@gmail.com>,
Tanguy Le Carrour <tanguy@bioneland.org>,
jgart <jgart@dismail.de>
Subject: [bug#69924] [PATCH 03/49] gnu: python-blosc: Move to python-compression.
Date: Wed, 20 Mar 2024 22:27:33 +0000 [thread overview]
Message-ID: <c60cc9983c9bbc0c16543296d37c792a431b7c39.1710967273.git.sharlatanus@gmail.com> (raw)
In-Reply-To: <cover.1710967273.git.sharlatanus@gmail.com>
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* gnu/packages/python-xyz.scm (python-blosc): Move from here ...
* gnu/packages/python-compression.scm: ... to here.
Change-Id: Ieed1b399602d0ba64b065d1c03ef0855ac52f71e
---
gnu/packages/python-compression.scm | 47 ++++++++++++++++++++++++++++-
gnu/packages/python-xyz.scm | 44 ---------------------------
2 files changed, 46 insertions(+), 45 deletions(-)
diff --git a/gnu/packages/python-compression.scm b/gnu/packages/python-compression.scm
index 691fbd3065..ef289bc4d1 100644
--- a/gnu/packages/python-compression.scm
+++ b/gnu/packages/python-compression.scm
@@ -3,7 +3,7 @@
;;; Copyright © 2017, 2019, 2021, 2022 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2017 Nikita <nikita@n0.is>
;;; Copyright © 2017 Julien Lepiller <julien@lepiller.eu>
-;;; Copyright © 2018-2020, 2022 Efraim Flashner <efraim@flashner.co.il>
+;;; Copyright © 2018-2020, 2022, 2023 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2020 Nicolas Goaziou <mail@nicolasgoaziou.fr>
;;; Copyright © 2020, 2022, 2023 Marius Bakke <marius@gnu.org>
;;; Copyright © 2021 Brendan Tildesley <mail@brendan.scot>
@@ -38,6 +38,7 @@ (define-module (gnu packages python-compression)
#:use-module (gnu packages libffi)
#:use-module (gnu packages compression)
#:use-module (gnu packages crates-io)
+ #:use-module (gnu packages cmake)
#:use-module (gnu packages check)
#:use-module (gnu packages maths)
#:use-module (gnu packages pkg-config)
@@ -49,6 +50,50 @@ (define-module (gnu packages python-compression)
#:use-module (gnu packages rust-apps)
#:use-module (gnu packages sphinx))
+(define-public python-blosc
+ (package
+ (name "python-blosc")
+ (version "1.11.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "blosc" version))
+ (sha256
+ (base32
+ "0xmjs28sgpnb940zrhw010dq2m9d8a5h4fgnjyk6645fgfr1j8f2"))
+ (snippet
+ #~(begin (use-modules (guix build utils))
+ (delete-file-recursively "blosc/c-blosc")))))
+ (build-system python-build-system)
+ (arguments
+ (list #:phases
+ #~(modify-phases %standard-phases
+ (add-after 'unpack 'find-blosc
+ (lambda* (#:key inputs #:allow-other-keys)
+ (setenv "USE_SYSTEM_BLOSC" "1")
+ (setenv "Blosc_ROOT" #$(this-package-input "c-blosc"))))
+ (replace 'check
+ (lambda* (#:key tests? #:allow-other-keys)
+ (when tests?
+ (invoke "python" "-m" "blosc.test")))))))
+ (propagated-inputs
+ (list python-scikit-build python-numpy))
+ (inputs (list c-blosc))
+ (native-inputs (list cmake-minimal))
+ (home-page "https://github.com/blosc/python-blosc")
+ (synopsis "Python wrapper for the Blosc data compressor library")
+ (description "Blosc is a high performance compressor optimized for binary
+data. It has been designed to transmit data to the processor cache faster
+than the traditional, non-compressed, direct memory fetch approach via a
+@code{memcpy()} system call.
+
+Blosc works well for compressing numerical arrays that contains data with
+relatively low entropy, like sparse data, time series, grids with
+regular-spaced values, etc.
+
+This Python package wraps the Blosc library.")
+ (license license:bsd-3)))
+
(define-public python-multivolumefile
(package
(name "python-multivolumefile")
diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm
index 7ed8c945be..7eacce5caf 100644
--- a/gnu/packages/python-xyz.scm
+++ b/gnu/packages/python-xyz.scm
@@ -27394,50 +27394,6 @@ (define-public python-locket
they use the same path.")
(license license:bsd-2)))
-(define-public python-blosc
- (package
- (name "python-blosc")
- (version "1.11.1")
- (source
- (origin
- (method url-fetch)
- (uri (pypi-uri "blosc" version))
- (sha256
- (base32
- "0xmjs28sgpnb940zrhw010dq2m9d8a5h4fgnjyk6645fgfr1j8f2"))
- (snippet
- #~(begin (use-modules (guix build utils))
- (delete-file-recursively "blosc/c-blosc")))))
- (build-system python-build-system)
- (arguments
- (list #:phases
- #~(modify-phases %standard-phases
- (add-after 'unpack 'find-blosc
- (lambda* (#:key inputs #:allow-other-keys)
- (setenv "USE_SYSTEM_BLOSC" "1")
- (setenv "Blosc_ROOT" #$(this-package-input "c-blosc"))))
- (replace 'check
- (lambda* (#:key tests? #:allow-other-keys)
- (when tests?
- (invoke "python" "-m" "blosc.test")))))))
- (propagated-inputs
- (list python-scikit-build python-numpy))
- (inputs (list c-blosc))
- (native-inputs (list cmake-minimal))
- (home-page "https://github.com/blosc/python-blosc")
- (synopsis "Python wrapper for the Blosc data compressor library")
- (description "Blosc is a high performance compressor optimized for binary
-data. It has been designed to transmit data to the processor cache faster
-than the traditional, non-compressed, direct memory fetch approach via a
-@code{memcpy()} system call.
-
-Blosc works well for compressing numerical arrays that contains data with
-relatively low entropy, like sparse data, time series, grids with
-regular-spaced values, etc.
-
-This Python package wraps the Blosc library.")
- (license license:bsd-3)))
-
(define-public python-partd
(package
(name "python-partd")
--
2.41.0
next prev parent reply other threads:[~2024-03-20 22:54 UTC|newest]
Thread overview: 51+ messages / expand[flat|nested] mbox.gz Atom feed top
2024-03-20 22:24 [bug#69924] [PATCH 00/49] gnu: Astronomy 2024/02 updates Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 01/49] gnu: calcmysky: Update to 0.3.2 Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 02/49] gnu: splash: Update to 3.10.3 Sharlatan Hellseher
2024-03-20 22:27 ` Sharlatan Hellseher [this message]
2024-03-20 22:27 ` [bug#69924] [PATCH 04/49] gnu: python-blosc: Simplify package Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 05/49] gnu: python-pytest-doctestplus: Update to 1.2.0 Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 06/49] gnu: python-pytest-arraydiff: Update to 0.6.1 Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 07/49] gnu: python-pytest-arraydiff: Enable tests Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 08/49] gnu: python-pytest-filter-subpackage: Update to 0.2.0 Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 09/49] gnu: python-zarr: Update to 2.17.1 Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 10/49] gnu: python-partd: Enable tests Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 11/49] gnu: python-zarr: Speed up tests Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 12/49] gnu: python-distributed: " Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 13/49] gnu: python-dask: " Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 14/49] gnu: python-stdatamodels: " Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 15/49] gnu: python-glymur: " Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 16/49] gnu: python-ginga: Update to 5.0.0 Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 17/49] gnu: python-astropy-iers-data: Update to 0.2024.3.18.0.29.47 Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 18/49] gnu: python-cdflib: Update to 1.2.6 Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 19/49] gnu: python-cdflib: Enable all tests Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 20/49] gnu: python-asdf-unit-schemas: Update to 0.2.0 Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 21/49] gnu: python-asdf-standard: Update to 1.1.1 Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 22/49] gnu: python-asdf-transform-schemas: Update to 0.5.0 Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 23/49] gnu: python-asdf: Update to 3.1.0 Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 24/49] gnu: python-asdf-coordinates-schemas: Update to 0.3.0 Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 25/49] gnu: python-asdf-wcs-schemas: Update to 0.4.0 Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 26/49] gnu: python-asdf-astropy: Update to 0.6.0 Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 27/49] gnu: python-pyvo: Update to 1.5.1 Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 28/49] gnu: python-astroquery: Update to 0.4.7 Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 29/49] gnu: python-gwcs: Update to 0.21.0 Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 30/49] gnu: python-drizzle: Update to 1.15.1 Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 31/49] gnu: python-suntime: Update to 1.3.2 Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 32/49] gnu: python-suntime: Refresh package style Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 33/49] gnu: python-radiospectra: Update to 0.5.0 Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 34/49] gnu: python-glymur: Update to 0.12.9 Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 35/49] gnu: python-specutils: Update to 1.13.0 Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 36/49] gnu: python-stcal: Update to 1.6.1 Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 37/49] gnu: python-stcal: Enable sanity check Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 38/49] gnu: python-stdatamodels: Update to 1.10.0 Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 39/49] gnu: python-crds: Update to 11.17.19 Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 40/49] gnu: python-pynbody: Update to 1.6.0 Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 41/49] gnu: Add python-asdf-zarr Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 42/49] gnu: Add python-asdf-compression Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 43/49] gnu: Add python-astroplan Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 44/49] gnu: Add python-nose-exclude Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 45/49] gnu: Add python-ewah-bool-utils Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 46/49] gnu: Add python-cmyt Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 47/49] gnu: Add python-pytest-examples Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 48/49] gnu: Add python-pydantic-settings Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 49/49] gnu: python-hvpy: Update to 1.1.0 Sharlatan Hellseher
2024-03-29 15:11 ` bug#69924: [PATCH 00/49] gnu: Astronomy 2024/02 updates Sharlatan Hellseher
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