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| | ;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2020 Nicolò Balzarotti <nicolo@nixo.xyz>
;;;
;;; This file is part of GNU Guix.
;;;
;;; GNU Guix is free software; you can redistribute it and/or modify it
;;; under the terms of the GNU General Public License as published by
;;; the Free Software Foundation; either version 3 of the License, or (at
;;; your option) any later version.
;;;
;;; GNU Guix is distributed in the hope that it will be useful, but
;;; WITHOUT ANY WARRANTY; without even the implied warranty of
;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
;;; GNU General Public License for more details.
;;;
;;; You should have received a copy of the GNU General Public License
;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
(define-module (gnu packages julia-xyz)
#:use-module ((guix licenses) #:prefix license:)
#:use-module (guix packages)
#:use-module (guix git-download)
#:use-module (guix build-system julia)
#:use-module (gnu packages curl)
#:use-module (gnu packages tls))
(define-public julia-binaryprovider
(package
(name "julia-binaryprovider")
(version "0.5.8")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/JuliaPackaging/BinaryProvider.jl")
(commit (string-append "v" version))))
(file-name "BinaryProvider")
(sha256
(base32 "174jmg4w8ncgfhdvfnm0p4cnlayw31j4s9sksqlwz1sipywqvww7"))))
(build-system julia-build-system)
;; We don't really need BinaryProvider (as guix provides the binaries) but
;; since it's a dependency of other packages we want to precompile it.
(arguments `(#:tests? #f))
(propagated-inputs `(("julia-sha" ,julia-sha)))
(inputs `(("curl" ,curl)))
(home-page "https://github.com/JuliaPackaging/BinaryProvider.jl")
(synopsis "Reliable Binary provider for Julia")
(description "@code{BinaryProvider.jl} simplifies the installation of
binaries required by julia packages.")
(license license:expat)))
(define-public julia-bufferedstreams
(package
(name "julia-bufferedstreams")
(version "1.0.0")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/BioJulia/BufferedStreams.jl")
(commit (string-append "v" version))))
(file-name "BufferedStreams")
(sha256
(base32 "0sf4sxbq55mg2pwxyxf0c839z1lk0yxg8nmb7617bfbvw31cp88z"))))
(build-system julia-build-system)
;; tests are freezing, see
;; https://travis-ci.org/BioJulia/BufferedStreams.jl/jobs/491050182
(arguments '(#:tests? #f))
(propagated-inputs `(("julia-compat" ,julia-compat)))
(home-page "https://github.com/BioJulia/BufferedStreams.jl")
(synopsis "Fast composable IO streams")
(description "@code{BufferedStreams} provides buffering for IO
operations. It can wrap any IO type automatically making incremental reading
and writing faster.")
(license license:expat)))
(define-public julia-compat
(package
(name "julia-compat")
(version "3.6.0")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/JuliaLang/Compat.jl")
(commit (string-append "v" version))))
(file-name "Compat")
(sha256
(base32 "0dxy0kpwgz3a9w665lp154x9yrnic89f2b27b1nmh69jhnnb2zgr"))))
(build-system julia-build-system)
(home-page "https://github.com/JuliaLang/Compat.jl")
(synopsis "Compatibility across Julia versions")
(description "The Compat package is designed to ease interoperability
between older and newer versions of the Julia language. The Compat package
provides a macro that lets you use the latest syntax in a backwards-compatible
way.")
(license license:expat)))
(define-public julia-inifile
(package
(name "julia-inifile")
(version "0.5.0")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/JuliaIO/IniFile.jl")
(commit "8ba59958495fa276d6489d2c3903e765d75e0bc0")))
(file-name "IniFile")
(sha256
(base32 "11h6f99jpbg729lplw841m68jprka7q3n8yw390bndlmcdsjabpd"))))
(build-system julia-build-system)
(home-page "https://github.com/JuliaIO/IniFile.jl")
(synopsis "Reading Windows-style INI files")
(description "This is a julia package that defines an IniFile type that
allows to interface with @file{.ini} files.")
(license license:expat)))
(define-public julia-mbedtls
(package
(name "julia-mbedtls")
(version "0.7.0")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/JuliaLang/MbedTLS.jl")
(commit (string-append "v" version))))
(file-name "MbedTLS")
(sha256
(base32 "1a8snw9gi21lm6r3kh6ly7ngi99s9k5shqkfiizj3g9li20q23h2"))))
(build-system julia-build-system)
(propagated-inputs
`(("julia-binaryprovider" ,julia-binaryprovider)))
(inputs `(("mbedtls-apache" ,mbedtls-apache)))
(arguments
`(#:phases
(modify-phases %standard-phases
(add-before 'install 'disable-network-tests
(lambda _
(substitute* "test/runtests.jl"
(("testhost =") "return #"))
#t))
;; Add binary dependency paths
(add-before 'precompile 'build-deps
(lambda* (#:key outputs source inputs #:allow-other-keys)
(let ((f (open-file
(string-append
(assoc-ref outputs "out")
"/share/julia/packages/"
(string-append
(strip-store-file-name source) "/deps/deps.jl"))
"w")))
(display (string-append "const libmbedcrypto = \""
(assoc-ref inputs "mbedtls-apache")
"/lib/libmbedcrypto.so\"\n") f)
(display (string-append "const libmbedtls = \""
(assoc-ref inputs "mbedtls-apache")
"/lib/libmbedtls.so\"\n") f)
(display (string-append "const libmbedx509 = \""
(assoc-ref inputs "mbedtls-apache")
"/lib/libmbedx509.so\"\n") f)
(close-port f))
#t)))))
(home-page "https://github.com/JuliaLang/MbedTLS.jl")
(synopsis "Apache's mbed TLS library wrapper")
(description "@code{MbedTLS.jl} provides a wrapper around the mbed TLS and
cryptography C libary for Julia.")
(license license:expat)))
(define-public julia-sha
(package
(name "julia-sha")
(version "0.5.7")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/staticfloat/SHA.jl")
;; tests fixed in this untagged version
(commit "97b17a7fabf894257726c33cbd78255ac380906d")))
(file-name "SHA")
(sha256
(base32 "169y78cmppj117cmh8ncnyh381caf9dsklaks5l40mia9jdcqbgl"))))
(build-system julia-build-system)
(propagated-inputs `(("julia-compat" ,julia-compat)))
(home-page "https://github.com/staticfloat/SHA.jl")
(synopsis
"Performant, 100% native-julia SHA1, SHA2, and SHA3 implementation")
(description "Julia package implementing SHA algorithms. Each exported
function takes in either an @code{Array{UInt8}}, a @code{ByteString} or an
@code{IO} object.")
(license license:expat)))
|