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| | ;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2017, 2019 Caleb Ristvedt <caleb.ristvedt@cune.org>
;;; Copyright © 2018, 2020, 2021 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2020 Jan (janneke) Nieuwenhuizen <janneke@gnu.org>
;;;
;;; This file is part of GNU Guix.
;;;
;;; GNU Guix is free software; you can redistribute it and/or modify it
;;; under the terms of the GNU General Public License as published by
;;; the Free Software Foundation; either version 3 of the License, or (at
;;; your option) any later version.
;;;
;;; GNU Guix is distributed in the hope that it will be useful, but
;;; WITHOUT ANY WARRANTY; without even the implied warranty of
;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
;;; GNU General Public License for more details.
;;;
;;; You should have received a copy of the GNU General Public License
;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
(define-module (guix store database)
#:use-module (sqlite3)
#:use-module (guix config)
#:use-module (guix serialization)
#:use-module (guix store deduplication)
#:use-module (guix base16)
#:use-module (guix progress)
#:use-module (guix build syscalls)
#:use-module ((guix build utils)
#:select (mkdir-p executable-file?))
#:use-module (guix build store-copy)
#:use-module (srfi srfi-1)
#:use-module (srfi srfi-11)
#:use-module (srfi srfi-19)
#:use-module (srfi srfi-26)
#:use-module (rnrs io ports)
#:use-module (ice-9 match)
#:use-module (system foreign)
#:export (sql-schema
%default-database-file
store-database-file
call-with-database
with-database
path-id
sqlite-register
register-items
%epoch
reset-timestamps))
;;; Code for working with the store database directly.
(define sql-schema
;; Name of the file containing the SQL scheme or #f.
(make-parameter #f))
(define* (store-database-directory #:key prefix state-directory)
"Return the store database directory, taking PREFIX and STATE-DIRECTORY into
account when provided."
;; Priority for options: first what is given, then environment variables,
;; then defaults. %state-directory, %store-directory, and
;; %store-database-directory already handle the "environment variables /
;; defaults" question, so we only need to choose between what is given and
;; those.
(cond (state-directory
(string-append state-directory "/db"))
(prefix
(string-append prefix %localstatedir "/guix/db"))
(else
%store-database-directory)))
(define* (store-database-file #:key prefix state-directory)
"Return the store database file name, taking PREFIX and STATE-DIRECTORY into
account when provided."
(string-append (store-database-directory #:prefix prefix
#:state-directory state-directory)
"/db.sqlite"))
(define (initialize-database db)
"Initializing DB, an empty database, by creating all the tables and indexes
as specified by SQL-SCHEMA."
(define schema
(or (sql-schema)
(search-path %load-path "guix/store/schema.sql")))
(sqlite-exec db (call-with-input-file schema get-string-all)))
(define* (call-with-database file proc #:key (wal-mode? #t))
"Pass PROC a database record corresponding to FILE. If FILE doesn't exist,
create it and initialize it as a new database. Unless WAL-MODE? is set to #f,
set journal_mode=WAL."
(let ((new? (and (not (file-exists? file))
(begin
(mkdir-p (dirname file))
#t)))
(db (sqlite-open file)))
;; Using WAL breaks for the Hurd <https://bugs.gnu.org/42151>.
(when wal-mode?
;; Turn DB in "write-ahead log" mode, which should avoid SQLITE_LOCKED
;; errors when we have several readers: <https://www.sqlite.org/wal.html>.
(sqlite-exec db "PRAGMA journal_mode=WAL;"))
;; Install a busy handler such that, when the database is locked, sqlite
;; retries until 30 seconds have passed, at which point it gives up and
;; throws SQLITE_BUSY.
(sqlite-exec db "PRAGMA busy_timeout = 30000;")
(dynamic-wind noop
(lambda ()
(when new?
(initialize-database db))
(proc db))
(lambda ()
(sqlite-close db)))))
;; XXX: missing in guile-sqlite3@0.1.2
(define SQLITE_BUSY 5)
(define (call-with-SQLITE_BUSY-retrying thunk)
"Call THUNK, retrying as long as it exits abnormally due to SQLITE_BUSY
errors."
(catch 'sqlite-error
thunk
(lambda (key who code errmsg)
(if (= code SQLITE_BUSY)
(call-with-SQLITE_BUSY-retrying thunk)
(throw key who code errmsg)))))
(define* (call-with-transaction db proc #:key restartable?)
"Start a transaction with DB and run PROC. If PROC exits abnormally, abort
the transaction, otherwise commit the transaction after it finishes.
RESTARTABLE? may be set to a non-#f value when it is safe to run PROC multiple
times. This may reduce contention for the database somewhat."
(define (exec sql)
(with-statement db sql stmt
(sqlite-fold cons '() stmt)))
;; We might use begin immediate here so that if we need to retry, we figure
;; that out immediately rather than because some SQLITE_BUSY exception gets
;; thrown partway through PROC - in which case the part already executed
;; (which may contain side-effects!) might have to be executed again for
;; every retry.
(exec (if restartable? "begin;" "begin immediate;"))
(catch #t
(lambda ()
(let-values ((result (proc)))
(exec "commit;")
(apply values result)))
(lambda args
;; The roll back may or may not have occurred automatically when the
;; error was generated. If it has occurred, this does nothing but signal
;; an error. If it hasn't occurred, this needs to be done.
(false-if-exception (exec "rollback;"))
(apply throw args))))
(define* (call-with-savepoint db proc
#:optional (savepoint-name "SomeSavepoint"))
"Call PROC after creating a savepoint named SAVEPOINT-NAME. If PROC exits
abnormally, rollback to that savepoint. In all cases, remove the savepoint
prior to returning."
(define (exec sql)
(with-statement db sql stmt
(sqlite-fold cons '() stmt)))
(dynamic-wind
(lambda ()
(exec (string-append "SAVEPOINT " savepoint-name ";")))
(lambda ()
(catch #t
proc
(lambda args
(exec (string-append "ROLLBACK TO " savepoint-name ";"))
(apply throw args))))
(lambda ()
(exec (string-append "RELEASE " savepoint-name ";")))))
(define* (call-with-retrying-transaction db proc #:key restartable?)
(call-with-SQLITE_BUSY-retrying
(lambda ()
(call-with-transaction db proc #:restartable? restartable?))))
(define* (call-with-retrying-savepoint db proc
#:optional (savepoint-name
"SomeSavepoint"))
(call-with-SQLITE_BUSY-retrying
(lambda ()
(call-with-savepoint db proc savepoint-name))))
(define %default-database-file
;; Default location of the store database.
(string-append %store-database-directory "/db.sqlite"))
(define-syntax with-database
(syntax-rules ()
"Open DB from FILE and close it when the dynamic extent of EXP... is left.
If FILE doesn't exist, create it and initialize it as a new database. Pass
#:wal-mode? to call-with-database."
((_ file db #:wal-mode? wal-mode? exp ...)
(call-with-database file (lambda (db) exp ...) #:wal-mode? wal-mode?))
((_ file db exp ...)
(call-with-database file (lambda (db) exp ...)))))
(define (call-with-statement db sql proc)
(let ((stmt (sqlite-prepare db sql #:cache? #t)))
(dynamic-wind
(const #t)
(lambda ()
(proc stmt))
(lambda ()
(sqlite-finalize stmt)))))
(define-syntax-rule (with-statement db sql stmt exp ...)
"Run EXP... with STMT bound to a prepared statement corresponding to the sql
string SQL for DB."
(call-with-statement db sql
(lambda (stmt) exp ...)))
(define (last-insert-row-id db)
;; XXX: (sqlite3) currently lacks bindings for 'sqlite3_last_insert_rowid'.
;; Work around that.
(with-statement db "SELECT last_insert_rowid();" stmt
(match (sqlite-fold cons '() stmt)
((#(id)) id)
(_ #f))))
(define path-id-sql
"SELECT id FROM ValidPaths WHERE path = :path")
(define* (path-id db path)
"If PATH exists in the 'ValidPaths' table, return its numerical
identifier. Otherwise, return #f."
(with-statement db path-id-sql stmt
(sqlite-bind-arguments stmt #:path path)
(match (sqlite-fold cons '() stmt)
((#(id) . _) id)
(_ #f))))
(define update-sql
"UPDATE ValidPaths SET hash = :hash, registrationTime = :time, deriver =
:deriver, narSize = :size WHERE id = :id")
(define insert-sql
"INSERT INTO ValidPaths (path, hash, registrationTime, deriver, narSize)
VALUES (:path, :hash, :time, :deriver, :size)")
(define-inlinable (assert-integer proc in-range? key number)
(unless (integer? number)
(throw 'wrong-type-arg proc
"Wrong type argument ~A: ~S" (list key number)
(list number)))
(unless (in-range? number)
(throw 'out-of-range proc
"Integer ~A out of range: ~S" (list key number)
(list number))))
(define* (update-or-insert db #:key path deriver hash nar-size time)
"The classic update-if-exists and insert-if-doesn't feature that sqlite
doesn't exactly have... they've got something close, but it involves deleting
and re-inserting instead of updating, which causes problems with foreign keys,
of course. Returns the row id of the row that was modified or inserted."
;; Make sure NAR-SIZE is valid.
(assert-integer "update-or-insert" positive? #:nar-size nar-size)
(assert-integer "update-or-insert" (cut >= <> 0) #:time time)
;; It's important that querying the path-id and the insert/update operation
;; take place in the same transaction, as otherwise some other
;; process/thread/fiber could register the same path between when we check
;; whether it's already registered and when we register it, resulting in
;; duplicate paths (which, due to a 'unique' constraint, would cause an
;; exception to be thrown). With the default journaling mode this will
;; prevent writes from occurring during that sensitive time, but with WAL
;; mode it will instead arrange to return SQLITE_BUSY when a write occurs
;; between the start of a read transaction and its upgrading to a write
;; transaction (see https://sqlite.org/rescode.html#busy_snapshot).
;; Experimentally, it seems this SQLITE_BUSY will ignore a busy_timeout and
;; immediately return (makes sense, since waiting won't change anything).
;; Note that when that kind of SQLITE_BUSY error is returned, it will keep
;; being returned every time we try to upgrade the same outermost
;; transaction to a write transaction. So when retrying, we have to restart
;; the *outermost* write transaction. We can't inherently tell whether
;; we're the outermost write transaction, so we leave the retry-handling to
;; the caller.
(call-with-savepoint db
(lambda ()
(let ((id (path-id db path)))
(if id
(with-statement db update-sql stmt
(sqlite-bind-arguments stmt #:id id
#:deriver deriver
#:hash hash #:size nar-size #:time time)
(sqlite-fold cons '() stmt))
(with-statement db insert-sql stmt
(sqlite-bind-arguments stmt
#:path path #:deriver deriver
#:hash hash #:size nar-size #:time time)
(sqlite-fold cons '() stmt)))
(last-insert-row-id db)))))
(define add-reference-sql
"INSERT OR REPLACE INTO Refs (referrer, reference) VALUES (:referrer, :reference);")
(define (add-references db referrer references)
"REFERRER is the id of the referring store item, REFERENCES is a list
ids of items referred to."
(with-statement db add-reference-sql stmt
(for-each (lambda (reference)
(sqlite-reset stmt)
(sqlite-bind-arguments stmt #:referrer referrer
#:reference reference)
(sqlite-fold cons '() stmt))
references)))
(define (timestamp)
"Return a timestamp, either the current time of SOURCE_DATE_EPOCH."
(match (getenv "SOURCE_DATE_EPOCH")
(#f
(current-time time-utc))
((= string->number seconds)
(if seconds
(make-time time-utc 0 seconds)
(current-time time-utc)))))
(define* (sqlite-register db #:key path (references '())
deriver hash nar-size
(time (timestamp)))
"Registers this stuff in DB. PATH is the store item to register and
REFERENCES is the list of store items PATH refers to; DERIVER is the '.drv'
that produced PATH, HASH is the base16-encoded Nix sha256 hash of
PATH (prefixed with \"sha256:\"), and NAR-SIZE is the size in bytes PATH after
being converted to nar form. TIME is the registration time to be recorded in
the database or #f, meaning \"right now\".
Every store item in REFERENCES must already be registered."
(let ((id (update-or-insert db #:path path
#:deriver deriver
#:hash hash
#:nar-size nar-size
#:time (time-second time))))
;; Call 'path-id' on each of REFERENCES. This ensures we get a
;; "non-NULL constraint" failure if one of REFERENCES is unregistered.
(add-references db id
(map (cut path-id db <>) references))))
\f
;;;
;;; High-level interface.
;;;
(define* (reset-timestamps file #:key preserve-permissions?)
"Reset the modification time on FILE and on all the files it contains, if
it's a directory. Canonicalize file permissions unless PRESERVE-PERMISSIONS?
is true."
;; Note: We're resetting to one second after the Epoch like 'guix-daemon'
;; has always done.
(let loop ((file file)
(type (stat:type (lstat file))))
(case type
((directory)
(unless preserve-permissions?
(chmod file #o555))
(utime file 1 1 0 0)
(let ((parent file))
(for-each (match-lambda
(("." . _) #f)
((".." . _) #f)
((file . properties)
(let ((file (string-append parent "/" file)))
(loop file
(match (assoc-ref properties 'type)
((or 'unknown #f)
(stat:type (lstat file)))
(type type))))))
(scandir* parent))))
((symlink)
(utime file 1 1 0 0 AT_SYMLINK_NOFOLLOW))
(else
(unless preserve-permissions?
(chmod file (if (executable-file? file) #o555 #o444)))
(utime file 1 1 0 0)))))
(define %epoch
;; When it all began.
(make-time time-utc 0 1))
(define* (register-items db items
#:key prefix
(registration-time (timestamp))
(log-port (current-error-port)))
"Register all of ITEMS, a list of <store-info> records as returned by
'read-reference-graph', in DB. ITEMS must be in topological order (with
leaves first.) REGISTRATION-TIME must be the registration time to be recorded
in the database; #f means \"now\". Write a progress report to LOG-PORT. All
of ITEMS must be protected from GC and locked during execution of this,
typically by adding them as temp-roots."
(define store-dir
(if prefix
(string-append prefix %storedir)
%store-directory))
(define (register db item)
(define to-register
(if prefix
(string-append %storedir "/" (basename (store-info-item item)))
;; note: we assume here that if path is, for example,
;; /foo/bar/gnu/store/thing.txt and prefix isn't given, then an
;; environment variable has been used to change the store directory
;; to /foo/bar/gnu/store, since otherwise real-path would end up
;; being /gnu/store/thing.txt, which is probably not the right file
;; in this case.
(store-info-item item)))
(define real-file-name
(string-append store-dir "/" (basename (store-info-item item))))
;; When TO-REGISTER is already registered, skip it. This makes a
;; significant differences when 'register-closures' is called
;; consecutively for overlapping closures such as 'system' and 'bootcfg'.
(unless (path-id db to-register)
(let-values (((hash nar-size) (nar-sha256 real-file-name)))
(call-with-retrying-transaction db
(lambda ()
(sqlite-register db #:path to-register
#:references (store-info-references item)
#:deriver (store-info-deriver item)
#:hash (string-append
"sha256:"
(bytevector->base16-string hash))
#:nar-size nar-size
#:time registration-time))))))
(let* ((prefix (format #f "registering ~a items" (length items)))
(progress (progress-reporter/bar (length items)
prefix log-port)))
(call-with-progress-reporter progress
(lambda (report)
(for-each (lambda (item)
(register db item)
(report))
items)))))
|