[bug#33545] [PATCH 0/2] Enable use of hypre via petsc

[bug#33545] [PATCH 0/2] Enable use of hypre via petsc

[Paul Garlick]

Hi Guix,

These two patches enable the HYPRE preconditioners to be used by packages
that use PETSc, such as FEniCS.

The first patch adds the necessary configure flag for petsc-openmpi.  The
second patch is needed to ensure that the check phase of the fenics build
continues to succeed.

Best regards,

Paul.

Paul Garlick (2):
  gnu: petsc-openmpi: Configure with support for HYPRE preconditioner.
  gnu: fenics: Skip extra demo in 'check' phase.

 gnu/packages/maths.scm      | 4 +++-
 gnu/packages/simulation.scm | 1 +
 2 files changed, 4 insertions(+), 1 deletion(-)

-- 
1.8.3.1

[bug#33545] [PATCH 1/2] gnu: petsc-openmpi: Configure with support for HYPRE preconditioner.

[Paul Garlick]

* gnu/packages/maths.scm (petsc-openmpi)[inputs]: Add hypre-openmpi.
[arguments]: Add 'with-hypre=1' flag.
---
 gnu/packages/maths.scm | 4 +++-
 1 file changed, 3 insertions(+), 1 deletion(-)

diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm
index 0cf8916..85af458 100644
--- a/gnu/packages/maths.scm
+++ b/gnu/packages/maths.scm
@@ -1767,6 +1767,7 @@ scientific applications modeled by partial differential equations.")
     (name "petsc-openmpi")
     (inputs
      `(("hdf5" ,hdf5-parallel-openmpi)
+       ("hypre" ,hypre-openmpi)
        ("metis" ,metis)
        ("mumps" ,mumps-openmpi)
        ("openmpi" ,openmpi)
@@ -1776,7 +1777,8 @@ scientific applications modeled by partial differential equations.")
     (arguments
      (substitute-keyword-arguments (package-arguments petsc)
        ((#:configure-flags cf)
-        ``("--with-mpiexec=mpirun"
+        ``("--with-hypre=1"
+           "--with-mpiexec=mpirun"
            "--with-metis=1"
            "--with-mumps=1"
            "--with-scalapack=1"
-- 
1.8.3.1

[bug#33545] [PATCH 2/2] gnu: fenics: Skip extra demo in 'check' phase.

[Paul Garlick]

* gnu/packages/simulation.scm (fenics)[arguments]: Add 'curl-curl'
demo to list of demos that require meshes supplied by git-lfs.
---
 gnu/packages/simulation.scm | 1 +
 1 file changed, 1 insertion(+)

diff --git a/gnu/packages/simulation.scm b/gnu/packages/simulation.scm
index 6144e23..bbe6d53 100644
--- a/gnu/packages/simulation.scm
+++ b/gnu/packages/simulation.scm
@@ -639,6 +639,7 @@ user interface to the FEniCS core components and external libraries.")
                  "'lift-drag', \n"
                  "'elastodynamics', \n"
                  "'dg-advection-diffusion', \n"
+                 "'curl-curl', \n"
                  "'contact-vi-tao', \n"
                  "'contact-vi-snes', \n"
                  "'collision-detection', \n"
-- 
1.8.3.1

bug#33545: [PATCH 0/2] Enable use of hypre via petsc

[Ludovic Courtès]

Hello,

Paul Garlick <pgarlick@tourbillion-technology.com> skribis:

> Paul Garlick (2):
>   gnu: petsc-openmpi: Configure with support for HYPRE preconditioner.
>   gnu: fenics: Skip extra demo in 'check' phase.

Applied both patches, thank you!

Ludo’.